Kribbella

(Redirected from Hongia) Genus of bacteria

Kribbella
Scientific classification
Domain:	Bacteria
Phylum:	Actinomycetota
Class:	Actinomycetia
Order:	Propionibacteriales
Family:	Kribbellaceae Nouioui et al. 2018
Genus:	Kribbella Park et al. 1999
Type species
Kribbella flavida Park et al. 1999
Species
See text
Synonyms
Hongia Lee, Kang & Hah 2000

Kribbella is a genus of bacteria first discovered in 1999.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI)

16S rRNA based LTP_08_2023

120 marker proteins based GTDB 08-RS214

Kribbella

K. deserti Sun et al. 2017

K. endophytica Kaewkla and Franco 2013

K. flavida Park et al. 1999

	K. italica Everest et al. 2015

	K. lupini Trujillo et al. 2006

K. sandramycini Park et al. 1999

K. yunnanensis Li et al. 2006

	K. albertanoniae Everest et al. 2013

	K. antibiotica Li et al. 2004

	K. ginsengisoli Cui et al. 2010

	K. koreensis (Lee et al. 2000) Sohn et al. 2003

L. sancticallisti Urzì et al. 2008

	K. catacumbae Urzì et al. 2008

	K. qitaiheensis Guo et al. 2018

	K. alba Li et al. 2006

	K. monticola Song et al. 2018

K. pittospori Kaewkla and Franco 2016

K. capetownensis Curtis et al. 2020

	K. amoyensis Xu et al. 2012

	K. turkmenica Saygin et al. 2019

K. swartbergensis Kirby et al. 2006

K. karoonensis Kirby et al. 2006

	K. aluminosa Carlsohn et al. 2007

	K. mirabilis Li et al. 2015

K. soli Ozdemir-Kocak et al. 2017

K. jiaozuonensis Zhao et al. 2019

K. jejuensis Song et al. 2004

K. sindirgiensis Ozdemir-Kocak et al. 2018

	K. hippodromi Everest and Meyers 2008

	K. solani Song et al. 2004

K. shirazensis Mohammadipanah et al. 2013

	K. podocarpi Curtis et al. 2018

	K. speibonae Curtis et al. 2020

Kribbella

K. amoyensis

	K. flavida

	K. italica

K. catacumbae

	K. monticola

	K. qitaiheensis

K. turkmenica

K. sandramycini

	K. albertanoniae

	K. antibiotica

	K. capetownensis

	K. pittospori

K. jiaozuonensis

K. solani

	K. aluminosa

	K. jejuensis

K. shirazensis

	K. sindirgiensis

	K. soli

Species incertae sedis:

"K. antiqua" Avtukh, Ariskina & Baryshnikova 2023
"K. kalugense" Avtukh, Ariskina & Baryshnikova 2023
"K. orskensis" Avtukh, Ariskina & Baryshnikova 2023
"K. pratensis" Avtukh, Ariskina & Baryshnikova 2023
"K. rubisoli" Avtukh, Ariskina & Baryshnikova 2023
"K. steppae" Avtukh, Ariskina & Baryshnikova 2023
"K. voronezhensis" Avtukh, Ariskina & Baryshnikova 2023

References

Park YH, Yoon JH, Shin YK, Suzuki K, Kudo T, Seino A, Kim HJ, Lee JS, Lee ST (1999). "Classification of "Nocardioides fulvus" IFO 14399 and Nocardioides sp. ATCC 39419 in Kribbella gen. nov., as Kribbella flavida sp. nov. and Kribbella sandramycini sp. nov". Int J Syst Bacteriol. 49 (2): 743–752. doi:10.1099/00207713-49-2-743. PMID 10319498.
Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Markus Göker M (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Front. Microbiol. 9: 2007. doi:10.3389/fmicb.2018.02007. PMC 6113628. PMID 30186281.
^ A.C. Parte; et al. "Kribbella". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
"New Life Found in Old Tombs".
Sayers; et al. "Kribbella". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
"The LTP". Retrieved 20 November 2023.
"LTP_all tree in newick format". Retrieved 20 November 2023.
"LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
"GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
"bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
"Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.

Everest, Gareth; Curtis, Sarah; De Leo, Filomena; Urzì, Clara; Meyers, Paul (2013). "Kribbella albertanoniae sp. nov., isolated from a Roman catacomb, and emended description of the genus Kribbella". International Journal of Systematic and Evolutionary Microbiology. 63 (Pt. 10): 3591–3596. doi:10.1099/ijs.0.050237-0. PMID 23584288.
Mohammadipanah, Fatemeh; Hamedi, Javad; Markus, Göker; Fiebig, Anne; Pukall, Rüdiger; Spröer, Cathrin; Klenk, Hans-Peter (2013). "Kribbella shirazensis sp. nov., isolated from Iranian soil". International Journal of Systematic and Evolutionary Microbiology. 63 (Pt. 9): 3369–3374. doi:10.1099/ijs.0.046847-0. PMID 23524355.
Urzì; De Leo, F; Schumann, P; et al. (2008). "Kribbella catacumbae sp. nov. and Kribbella sancticallisti sp. nov., isolated from whitish-grey patinas in the catacombs of St Callistus in Rome, Italy". International Journal of Systematic and Evolutionary Microbiology. 58 (Pt 9): 2090–2097. doi:10.1099/ijs.0.65613-0. PMID 18768610.

Prokaryotes: Bacteria classification

(major groups

Terrabacteria
BV1, BV3, BV5

others	Actinomycetota Acidimicrobiia Actinomycetia "Aquicultoria" Coriobacteriia "Geothermincolia" "Humimicrobiia" Rubrobacteria Thermoleophilia "Bipolaricaulota" "Bipolaricaulia" Chloroflexota "Caldilineia" Chloroflexia Dehalococcoidia Ktedonobacteria "Limnocylindria" Deinococcota "Deinococcia" "Dormiibacterota" "Dormibacteria" Armatimonadota "Abditibacteriia" Armatimonadia Chthonomonadia Fimbriimonadia "Heboniibacteriia" "Zipacnadia" "Eremiobacterota" "Eudoremicrobiia" "Xenobiia" "Eremiobacteria"
Cyanoprokaryota	Cyanobacteriota Cyanobacteria "Sericytochromatia" "Vampirovibrionophyceae" "Margulisiibacteriota" "Marinamargulisbacteria" "Riflemargulisbacteria" "Saganbacteria" "Termititenacia"
Firmicutes BV3 Low GC	Bacillota "Bacillia" Bacillota A "Clostridiia" "Thermoanaerobacteria" "Thermosediminibacteria" Bacillota D "Dethiobacteria" "Natranaerobiia" "Proteinivoracia" Bacillota E "Sulfobacillia" "Symbiobacteriia" "Thermaerobacteria" Bacillota G "Hydrogenisporia" Limnochordia "Desulfotomaculota" "Carboxydocellia" "Carboxydothermia" "Dehalobacteriia" "Desulfitobacteriia" "Desulfotomaculia" "Moorellia" "Peptococcia" "Syntrophomonadia" "Thermincolia" "Halanaerobiaeota" "Halanaerobiia" "Selenobacteria" "Selenomonadia"

CPR group

"Elulota"
- "Elulimicrobia"
"Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"

Thermotogida

Synergistetes	Atribacterota Atribacteria Synergistota Synergistia
Thermocalda	Caldisericota Caldisericia Coprothermobacterota Coprothermobacteria Dictyoglomerota Dictyoglomeria "Lithacetigenota" "Lithacetigenia" "Thermodesulfobiota" "Thermodesulfobiia" Thermotogota "Thermotogia"

Fusobacterida

Fusobacteriota
- Fusobacteriia
"Macinerneyibacteriota"
- "Macinerneyibacteriia"
"Muiribacteriota"
- "Muiribacteriia"
"Rifleibacteriota"
- "Ozemibacteria"
"Walliibacteriota"

Hydrobacteria
BV2, BV4

Clade 1

"Aerophobota"
- "Aerophobia"
"Auribacterota"
- "Ancaeobacteria"
- "Auribacteria"
- "Erginobacteria"
- "Tritonobacteria"
"Desantisiibacteriota"
Elusimicrobiota
- Elusimicrobiia
- Endomicrobiia
"Firestoneibacteriota"
"Goldiibacteriota"
"Omnitrophota"
- "Omnitrophia"
- "Velamenicoccia"
"Ratteibacteriota"

Clade 2

"Abyssubacteria"
"Hinthialibacterota"
- "Hinthialibacteria"
"Hydrogenedentota"
- "Hydrogenedentia"
"Poribacteriota"
"Saltatorellota"
- "Saltatorellae"
"Sumerlaeota"
- "Sumerlaeia"

Spirochaeto
bacteriobiontes

"Babelota"
- "Babeliae"
"Lindowiibacteriota"
Spirochaetota
- "Brevinematia"
- "Brachyspirae"
- "Exilispiria"
- "Leptospiria"
- "Spirochaetia"

PVC group
(Planctobacteria)

Chlamydiota
- Chlamydiia
Planctomycetota
- "Brocadiia"
- Phycisphaeria
- Planctomycetia
- "Uabimicrobiia"
Verrucomicrobiota
- Kiritimatiellia
- Lentisphaeria
- Verrucomicrobiia

FCB group
(Sphingobacteria)

Bacteroidota
- Bacteroidia
- Chlorobiia
- "Ignavibacteriia"
- "Kapabacteria"
- "Kryptoniia"
- Rhodothermia
Calditrichota
- Calditrichia
"Cloacimonadota"
- "Cloacimonadia"
"Coatesiibacteriota"
"Cosmopoliota"
- "Cosmopolitia"
"Delongiibacteriota"
"Edwardsiibacteriota"
"Eiseniibacteriota"
"Electryoneota"
- "Electryoneia"
- "Tariuqbacteria"
"Fermentibacterota"
- "Fermentibacteria"
Fibrobacterota
- Chitinivibrionia
- Fibrobacteria
- "Raymondbacteriia"
Gemmatimonadota
- Gemmatimonadia
- "Glassbacteria"
"Heilongiota"
- "Heilongiia"
"Hydrothermota"
- "Hydrothermia"
- "Stahlbacteria"
"Krumholzibacteriota"
- "Krumholzibacteriia"
"Latescibacterota"
- "Handelsmanbacteria"
- "Latescibacteria"
"Neomarinimicrobiota"
"Marinisomatota"
- "Marinisomatia"
"Tianyaibacteriota"
"Zixiibacteriota"

Proteobacteria
BV2

Aquificida	"Acidulodesulfobacteriota" "Acidulodesulfobacteriia" Aquificota Aquificia "Desulfurobacteriia" Campylobacterota "Campylobacteria" Desulfurellia "Calescibacteriota" "Calescibacteriia" Chrysiogenota Chrysiogenia "Dadaibacteriota" "Dadabacteria" Deferribacterota "Deferribacteria" Desulfobacterota G Syntrophorhabdia "Thermosulfidibacterota" "Thermosulfidibacteria"
Deltaproteobacteria	Bdellovibrionota Bacteriovoracia Bdellovibrionia Oligoflexia "Binatota" "Binatia" "Deferrimicrobiota" "Anaeroferrophilia" "Deferrimicrobiia" "Deferrisomatota" Deferrisomatia "Desulfuromonadota" Desulfuromonadia "Lernaellota" "Lernaellia" "Methylomirabilota" "Methylomirabilia" "Moduliflexota" "Moduliflexia" Myxococcota Myxococcia "Bradymonadia" Polyangiia Nitrospinota Nitrospinia Nitrospirota Nitrospiria "Thermodesulfovibrionia" SAR324 "Lambdaproteobacteria" "Schekmaniibacteriota" "Tectimicrobiota" "Entotheonellia" "Thermodesulfobacteriota"
others	Acidobacteriota "Acidobacteriia" "Aminicenantia" Blastocatellia "Fischerbacteria" "Guanabaribacteriia" "Holophagia" "Polarisedimenticolia" Thermoanaerobaculia Vicinamibacteria "Canglongiota" "Canglongiia" "Leptospirillaeota" "Leptospirillia" Pseudomonadota "Caulobacteria" "Mariprofundia" "Magnetococcia" "Pseudomonadia"

others

Source: Bergey's Manual (2001–2012)
Alternative views: Wikispecies

Taxon identifiers
Kribbella	Wikidata: Q6436956 Wikispecies: Kribbella EoL: 97301 GBIF: 3224344 IRMNG: 1029334 ITIS: 957424 LPSN: kribbella NCBI: 182639 Open Tree of Life: 697627 WoRMS: 559755

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See also

References

Further reading