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SGMS1

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Protein-coding gene in the species Homo sapiens
SGMS1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2D8C

Identifiers
AliasesSGMS1, MOB, MOB1, SMS1, TMEM23, hmob33, sphingomyelin synthase 1
External IDsOMIM: 611573; MGI: 2444110; HomoloGene: 27040; GeneCards: SGMS1; OMA:SGMS1 - orthologs
Gene location (Human)
Chromosome 10 (human)
Chr.Chromosome 10 (human)
Chromosome 10 (human)Genomic location for SGMS1Genomic location for SGMS1
Band10q11.23Start50,305,586 bp
End50,625,163 bp
Gene location (Mouse)
Chromosome 19 (mouse)
Chr.Chromosome 19 (mouse)
Chromosome 19 (mouse)Genomic location for SGMS1Genomic location for SGMS1
Band19|19 C1Start32,122,727 bp
End32,389,714 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • palpebral conjunctiva

  • retinal pigment epithelium

  • Epithelium of choroid plexus

  • germinal epithelium

  • corpus callosum

  • hair follicle

  • skin of thigh

  • C1 segment

  • skin of hip
Top expressed in
  • spermatid

  • seminiferous tubule

  • retinal pigment epithelium

  • Epithelium of choroid plexus

  • sciatic nerve

  • left lung lobe

  • interventricular septum

  • vestibular membrane of cochlear duct

  • right lung lobe

  • spermatocyte
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

259230

208449

Ensembl

ENSG00000198964

ENSMUSG00000040451

UniProt

Q86VZ5

Q8VCQ6

RefSeq (mRNA)

NM_147156

NM_001168525
NM_001168526
NM_144792
NM_001362423

RefSeq (protein)

NP_671512

NP_001161997
NP_001161998
NP_659041
NP_001349352

Location (UCSC)Chr 10: 50.31 – 50.63 MbChr 19: 32.12 – 32.39 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Phosphatidylcholine:ceramide cholinephosphotransferase 1 is an enzyme that in humans is encoded by the SGMS1 gene.

Function

The protein encoded by this gene is predicted to be a five-pass transmembrane protein. This gene may be predominately expressed in brain.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000198964Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000040451Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Vladychenskaya IP, Dergunova LV, Limborska SA (Feb 2002). "In vitro and in silico analysis of the predicted human MOB gene encoding a phylogenetically conserved transmembrane protein". Biomolecular Engineering. 18 (6): 263–8. doi:10.1016/S1389-0344(01)00110-1. PMID 11841947.
  6. Yamaoka S, Miyaji M, Kitano T, Umehara H, Okazaki T (Apr 2004). "Expression cloning of a human cDNA restoring sphingomyelin synthesis and cell growth in sphingomyelin synthase-defective lymphoid cells". The Journal of Biological Chemistry. 279 (18): 18688–93. doi:10.1074/jbc.M401205200. PMID 14976195.
  7. ^ "Entrez Gene: TMEM23 transmembrane protein 23".

Further reading

PDB gallery
  • 2d8c: Solution structure of the sam-domain of mouse phosphatidyl ceramidecholinephosphotransferase 1 2d8c: Solution structure of the sam-domain of mouse phosphatidyl ceramidecholinephosphotransferase 1


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