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TPSD1

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Protein-coding gene in the species Homo sapiens
TPSD1
Identifiers
AliasesTPSD1, MCP7-LIKE, MCP7L1, MMCP-7L, tryptase delta 1
External IDsOMIM: 609272; MGI: 96942; HomoloGene: 130655; GeneCards: TPSD1; OMA:TPSD1 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)
Chromosome 16 (human)Genomic location for TPSD1Genomic location for TPSD1
Band16p13.3Start1,256,059 bp
End1,259,008 bp
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)
Chromosome 17 (mouse)Genomic location for TPSD1Genomic location for TPSD1
Band17 A3.3|17 12.53 cMStart25,585,279 bp
End25,588,072 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • mucosa of transverse colon

  • right lung

  • fundus

  • urinary bladder

  • body of stomach

  • skin of leg

  • upper lobe of left lung

  • right coronary artery

  • subcutaneous adipose tissue

  • ectocervix
Top expressed in
  • dermis

  • lip

  • Ileal epithelium

  • lactiferous gland

  • foreskin

  • muscle of thigh

  • extraocular muscle

  • skin of back

  • ankle

  • gastric mucosa
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

23430

17229

Ensembl

ENSG00000095917

ENSMUSG00000033825

UniProt

Q9BZJ3

P21845

RefSeq (mRNA)

NM_012217

NM_010781

RefSeq (protein)

NP_036349

NP_034911

Location (UCSC)Chr 16: 1.26 – 1.26 MbChr 17: 25.59 – 25.59 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Tryptase delta is an enzyme that in humans is encoded by the TPSD1 gene.

Tryptases comprise a family of trypsin-like serine proteases, the peptidase family S1. Tryptases are enzymatically active only as heparin-stabilized tetramers, and they are resistant to all known endogenous proteinase inhibitors. Several tryptase genes are clustered on chromosome 16p13.3. These genes are characterized by several distinct features. They have a highly conserved 3' UTR and contain tandem repeat sequences at the 5' flank and 3' UTR which are thought to play a role in regulation of the mRNA stability. Although this gene may be an exception, most of the tryptase genes have an intron immediately upstream of the initiator Met codon, which separates the site of transcription initiation from protein coding sequence. This feature is characteristic of tryptases but is unusual in other genes. Tryptases have been implicated as mediators in the pathogenesis of asthma and other allergic and inflammatory disorders. This gene was once considered to be a pseudogene, although it is now believed to be a functional gene that encodes a protein.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000095917Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000033825Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Pallaoro M, Fejzo MS, Shayesteh L, Blount JL, Caughey GH (Feb 1999). "Characterization of genes encoding known and novel human mast cell tryptases on chromosome 16p13.3". J Biol Chem. 274 (6): 3355–62. doi:10.1074/jbc.274.6.3355. PMID 9920877.
  6. ^ "Entrez Gene: TPSD1 tryptase delta 1".

Further reading

Endopeptidases: serine proteases/serine endopeptidases (EC 3.4.21)
Digestive enzymes
Coagulation
Complement system
Other immune system
Venombin
Other
Enzymes
Activity
Regulation
Classification
Kinetics
Types
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