Revision as of 12:05, 9 July 2011 editCheMoBot (talk | contribs)Bots141,565 edits Updating {{chembox}} (changes to watched fields - updated 'UNII_Ref', 'ChEMBL_Ref', 'KEGG_Ref') per Chem/Drugbox validation (report errors or [[user talk:← Previous edit |
Latest revision as of 17:54, 23 December 2024 edit undoInnerstream (talk | contribs)Autopatrolled, Extended confirmed users4,032 editsNo edit summary |
(28 intermediate revisions by 12 users not shown) |
Line 1: |
Line 1: |
|
{{Chembox |
|
{{Chembox |
|
| Watchedfields = changed |
|
| Watchedfields = changed |
|
| verifiedrevid = 431382949 |
|
| verifiedrevid = 438566750 |
|
| ImageFile = 2,6-Pyridinedicarbothioicacid.svg |
|
| ImageFile = 2,6-Pyridinedicarbothioicacid.svg |
|
| ImageSize = |
|
| ImageSize = |
|
| ImageAlt = |
|
| ImageAlt = Skeletal formula of 2,6-pyridinedicarbothioic acid |
|
| IUPACName = 2,6-pyridinedicarbothioic acid |
|
| ImageFile1 = 2,6-Pyridinedicarbothioic acid 3D ball.png |
|
|
| ImageSize1 = 220 |
|
|
| ImageAlt1 = Ball-and-stick model of the 2,6-pyridinedicarbothioic acid molecule |
|
|
| IUPACName = 2,6-Pyridinedicarbothioic acid |
|
|
| PIN = Pyridine-2,6-bis(carbothioic ''S''-acid) |
|
| OtherNames = PDTC, dithiopyridinedicarbothioic acid |
|
| OtherNames = PDTC, dithiopyridinedicarbothioic acid |
|
| Section1 = {{Chembox Identifiers |
|
|Section1={{Chembox Identifiers |
|
|
| CASNo_Ref = {{cascite|correct|CAS}} |
|
| CASNo = 69945-42-2 |
|
| CASNo = 69945-42-2 |
⚫ |
| PubChem =25202662 |
|
|
|
| UNII_Ref = {{fdacite|correct|FDA}} |
⚫ |
| SMILES = C1=CC(=NC(=C1)C(=O)S)C(=O)S |
|
|
| PubChem = 10214455 |
|
| UNII = KJ7K75Z4JS |
|
⚫ |
<!--| PubChem =25202662 twice?--> |
⚫ |
| ChemSpiderID_Ref = {{chemspidercite|correct|chemspider}} |
|
|
⚫ |
| SMILES = C1=CC(=NC(=C1)C(=O)S)C(=O)S |
|
|
| PubChem = 10214455 |
|
⚫ |
| ChemSpiderID_Ref = {{chemspidercite|correct|chemspider}} |
|
| ChemSpiderID = 8389947 |
|
| ChemSpiderID = 8389947 |
|
| SMILES = O=C(S)c1nc(C(=O)S)ccc1 |
|
| SMILES1 = O=C(S)c1nc(C(=O)S)ccc1 |
|
| StdInChI_Ref = {{stdinchicite|correct|chemspider}} |
|
| StdInChI_Ref = {{stdinchicite|correct|chemspider}} |
|
| StdInChI=1S/C7H5NO2S2/c9-6(11)4-2-1-3-5(8-4)7(10)12/h1-3H,(H,9,11)(H,10,12) |
|
| StdInChI=1S/C7H5NO2S2/c9-6(11)4-2-1-3-5(8-4)7(10)12/h1-3H,(H,9,11)(H,10,12) |
|
| StdInChIKey_Ref = {{stdinchicite|correct|chemspider}} |
|
| StdInChIKey_Ref = {{stdinchicite|correct|chemspider}} |
|
| StdInChIKey = SSRIAMRLMUFTNV-UHFFFAOYSA-N |
|
| StdInChIKey = SSRIAMRLMUFTNV-UHFFFAOYSA-N |
|
}} |
|
}} |
|
| Section2 = {{Chembox Properties |
|
|Section2={{Chembox Properties |
|
| C=7|H=5|O=2|S=2 |
|
| C=7 | H=5 | O=2 | S=2 |
|
| Appearance =White crystalline solid |
|
| Appearance =White crystalline solid |
|
| Density = 1.415 g/cm<sup>3</sup> |
|
| Density = 1.415 g/cm<sup>3</sup> |
|
| MeltingPtCL = 97 |
|
| MeltingPtC = 97 to 99 |
|
| MeltingPtCH = 99 |
|
| BoilingPtC = 404.4 |
|
⚫ |
| Solubility = 1000 g/L (5.02 mol/L)}} |
|
| BoilingPtC = 404.4 |
|
|
⚫ |
|Section3={{Chembox Hazards |
⚫ |
| Solubility = 1000 g/L (5.02 mol/L)}} |
|
|
⚫ |
|MainHazards = acidic |
⚫ |
| Section3 = {{Chembox Hazards |
|
|
|
|FlashPtC = 198.4}} |
⚫ |
| MainHazards = acidic |
|
|
| FlashPt = {{convert|198.4|C|F}} |
|
|
| Autoignition = }} |
|
|
}} |
|
}} |
|
|
|
|
|
'''2,6-Pyridinedicarbothioic acid''' (PDTC) is an ] compound that is produced by some bacteria. It functions as a ], a small ] agent with a high affinity for ]. Siderophores are deployed as ] scavengers for ]. Siderophores solubilize compounds by forming strong complexes. PDTC is secreted by the ] ] '']'' and '']''.<ref>{{cite journal | doi = 10.1007/978-3-211-99661-4_1 | title = Microbial Siderophores | year = 2010 | last1 = Budzikiewicz | first1 = Herbert | volume = 92 | pages = 1–75}}</ref> |
|
'''2,6-Pyridinedicarbothioic acid''' (PDTC) is an ] compound that is produced by some bacteria. It functions as a , a low molecular weight compound that ]. Siderophores solubilize compounds by forming strong complexes. PDTC is secreted by the ] ] '']'' and '']''.<ref>{{cite book |doi=10.1007/978-3-211-99661-4_1 |year=2010 |last=Budzikiewicz |first=Herbert |title=Fortschritte der Chemie organischer Naturstoffe / Progress in the Chemistry of Organic Natural Products, Vol. 92 |editor-first=A. Douglas |editor-last=Kinghorn |editor-first2=Heinz |editor-last2=Falk |editor-first3=Junichi |editor-last3=Kobayashi |volume=92 |trans-title=Progress in the Chemistry of Organic Natural Products |chapter=Microbial Siderophores |pages=1–75 |pmid=20198464 |isbn=978-3-211-99660-7}}</ref> |
|
|
|
|
|
==Synthesis and biosynthesis== |
|
==Synthesis and biosynthesis== |
|
PDTC can be synthesized by treating the pyridine-2,6-dicarboxylic acid (or its diacid dichloride) with H<sub>2</sub>S in dry ]: |
|
PDTC can be synthesized in the laboratory by treating the diacid dichloride of ] with H<sub>2</sub>S in ]: |
|
|
:{{chem2|NC5H3(COCl)2 + 2 H2S + 2 C5H5N → + Cl}} |
|
:NC<sub>5</sub>H<sub>3</sub>(COOH)<sub>2</sub> + 2 H<sub>2</sub>S → NC<sub>5</sub>H<sub>3</sub>(COSH)<sub>2</sub> + 2 H<sub>2</sub>O |
|
|
|
|
|
|
This produces an orange 1:1 ] salt of 2,6-pyridinedicarbothioate. Treatment of this salt with acid give PDTC, which can then be extracted with ]. |
|
This route produces the ] salt of pyridinium-2,6-dicarbothioate. Treatment of this orange-colored salt with ] gives colorless PDTC, which can then be extracted with ].<ref>{{cite journal |doi=10.1080/03086648308080490 |title=Zur Struktur Eines 1:1-Adduktes von Pyridin-2,6-Dicarbothiosäure und Pyridin |date=1983 |last1=Hildebrand |first1=U. |last2=Ockels |first2=W. |last3=Lex |first3=J. |last4=Budzikiewicz |first4=H. |journal=Phosphorus and Sulfur and the Related Elements |volume=16 |issue=3 |pages=361–364 }}</ref> |
|
|
|
|
|
The biosynthesis of PDTC remains unclear although some insights can be deduced from the genetics.<ref>{{cite journal | doi = 10.1186/1471-2148-2-8 | year = 2002 | last1 = Cortese | first1 = Marc S | last2 = Caplan | first2 = Allan B | last3 = Crawford | first3 = Ronald L | journal = BMC Evolutionary Biology | volume = 2 | pages = 8 | pmid = 11972321 | title = Structural, functional, and evolutionary analysis of moeZ, a gene encoding an enzyme required for the synthesis of the Pseudomonas metabolite, pyridine-2,6-bis(thiocarboxylic acid) | pmc = 115864}}</ref> It is suggested that ''Pseudomonas stutzeri'' may have acquired at least one of the genes by lateral transfer from ].<ref name = cortese>{{cite journal | doi = 10.1023/A:1015241925322 | year = 2002 | last1 = Cortese | first1 = Marc S. | last2 = Paszczynski | first2 = Andrzej | last3 = Lewis | first3 = Thomas A. | last4 = Sebat | first4 = Jonathan L. | last5 = Borek | first5 = Vladimir | last6 = Crawford | first6 = Ronald L. | journal = BioMetals | volume = 15 | issue = 2 | pages = 103–120 | pmid = 12046919 | title = Metal chelating properties of pyridine-2,6-bis(thiocarboxylic acid) produced by Pseudomonas spp. And the biological activities of the formed complexes}}</ref> In a proposed biosynthetic sequence pyridine-2,6-dicarboxylic acid, a known bacterial metabolite,<ref name = cortese/> is activated as its bis-adenosine monophosphate (AMP) derivative. The sulfur donor and its activation remain uncertain.<ref name = budzi>{{cite journal | doi = 10.1023/A:1024012015127 | year = 2003 | last1 = Budzikiewicz | first1 = H. | journal = Biodegradation | volume = 14 | issue = 2 | pages = 65–72 | pmid = 12877462 | title = Heteroaromatic monothiocarboxylic acids from Pseudomonas spp}}</ref> |
|
The biosynthesis of PDTC remains unclear although some insights can be deduced from the genetics.<ref>{{cite journal | doi = 10.1186/1471-2148-2-8 | year = 2002 | last1 = Cortese | first1 = Marc S | last2 = Caplan | first2 = Allan B | last3 = Crawford | first3 = Ronald L | journal = BMC Evolutionary Biology | volume = 2 | pages = 8 | pmid = 11972321 | title = Structural, functional, and evolutionary analysis of moeZ, a gene encoding an enzyme required for the synthesis of the Pseudomonas metabolite, pyridine-2,6-bis(thiocarboxylic acid) | pmc = 115864 | doi-access = free }}</ref> It is suggested that ''Pseudomonas stutzeri'' may have acquired at least one of the genes by lateral transfer from ].<ref name = cortese>{{cite journal | doi = 10.1023/A:1015241925322 | year = 2002 | last1 = Cortese | first1 = Marc S. | last2 = Paszczynski | first2 = Andrzej | last3 = Lewis | first3 = Thomas A. | last4 = Sebat | first4 = Jonathan L. | last5 = Borek | first5 = Vladimir | last6 = Crawford | first6 = Ronald L. | journal = BioMetals | volume = 15 | issue = 2 | pages = 103–120 | pmid = 12046919 | title = Metal chelating properties of pyridine-2,6-bis(thiocarboxylic acid) produced by ''Pseudomonas'' spp. And the biological activities of the formed complexes| s2cid = 5545637 }}</ref> In a proposed biosynthetic sequence pyridine-2,6-dicarboxylic acid, a known bacterial metabolite,<ref name = cortese/> is activated as its bis-adenosine monophosphate (AMP) derivative. The sulfur donor and its activation remain uncertain.<ref name = budzi>{{cite journal | doi = 10.1023/A:1024012015127 | year = 2003 | last1 = Budzikiewicz | first1 = H. | journal = Biodegradation | volume = 14 | issue = 2 | pages = 65–72 | pmid = 12877462 | title = Heteroaromatic monothiocarboxylic acids from ''Pseudomonas'' spp| s2cid = 29898226 }}</ref> |
|
|
|
|
|
==Coordination chemistry== |
|
==Coordination chemistry== |
|
|
] |
|
PDTC binds to both Fe<sup>2+</sup> and Fe<sup>3+</sup>. The ferric complex is brown, whereas the ferrous complex is blue. In the presence of air, the ferrous complex oxidizes to the ferric compound.{{cn|date=May 2011}} It is iron selective<ref name = cortese/> as only the Fe complex is soluble in water. PDTC is produced mainly during the exponential phase of bacterial growth. The conditions at which ''Pseudomonas'' produces PDTC is 25 °C, pH=8 and sufficient aeration.<ref name = budzi/> |
|
PDTC binds to both Fe<sup>2+</sup> and Fe<sup>3+</sup>. The ferric complex is brown, whereas the ferrous complex is blue. In the presence of air, the ferrous complex oxidizes to the ferric compound.<ref>Ockels, W., Roemer, A., Budzikiewicz, H., Korth, H., Pulverer, G., "Bacterial constituents. II. An iron(II) complex of pyridine-2,6-di-(monothiocarboxylic acid) - a novel bacterial metabolic product", Tetrahedron Lett. 1978, 3341. {{doi|10.1016/S0040-4039(01)85634-3}}</ref> It is iron selective<ref name = cortese/> as only the Fe complex is soluble in water. PDTC is produced mainly during the exponential phase of bacterial growth. The conditions at which ''Pseudomonas'' produces PDTC is 25 °C, pH=8 and sufficient aeration.<ref name = budzi/> |
|
|
|
|
|
== See also == |
|
== See also == |
Line 54: |
Line 60: |
|
|
|
|
|
{{DEFAULTSORT:Pyridinedicarbothioic acid, 2,6-}} |
|
{{DEFAULTSORT:Pyridinedicarbothioic acid, 2,6-}} |
|
] |
|
] |
|
] |
|
] |