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AARS1

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Gene on human chromosome 16, implicated in neuropathy.

AARS1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4XEO, 4XEM

Identifiers
AliasesAARS1, CMT2N, EIEE29, alanyl-tRNA synthetase, AARS, alanyl-tRNA synthetase 1, DEE29, TTD8, HDLS2
External IDsOMIM: 601065; MGI: 2384560; HomoloGene: 1213; GeneCards: AARS1; OMA:AARS1 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)
Chromosome 16 (human)Genomic location for AARS1Genomic location for AARS1
Band16q22.1Start70,251,983 bp
End70,289,707 bp
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)
Chromosome 8 (mouse)Genomic location for AARS1Genomic location for AARS1
Band8|8 E1Start111,759,776 bp
End111,784,296 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • beta cell

  • frontal pole

  • Brodmann area 10

  • right frontal lobe

  • middle frontal gyrus

  • paraflocculus of cerebellum

  • Brodmann area 9

  • stromal cell of endometrium

  • cingulate gyrus

  • cerebellar vermis
Top expressed in
  • calvaria

  • left lobe of liver

  • facial motor nucleus

  • lacrimal gland

  • stroma of bone marrow

  • anterior horn of spinal cord

  • endothelial cell of lymphatic vessel

  • somite

  • primitive streak

  • crypt of lieberkuhn of small intestine
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

16

234734

Ensembl

ENSG00000090861

ENSMUSG00000031960

UniProt

P49588

Q8BGQ7

RefSeq (mRNA)

NM_001605

NM_146217

RefSeq (protein)

NP_001596

NP_666329

Location (UCSC)Chr 16: 70.25 – 70.29 MbChr 8: 111.76 – 111.78 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Alanyl—tRNA synthetase 1 (AARS1) is an enzyme that is encoded by the AARS1 gene in humans and is a member of the aminoacyl-tRNA synthetases (ARSs) family of enzymes.

Clinical significance

Charcot-Marie-Tooth Disease

Charcot-Marie-Tooth Disease type 2 (CMT2) and other peripheral neuropathies have been linked to mutations in the AARS1, GARS1, HARS1, WARS1, and YARS1 genes. Mutations in these genes can encode for faulty aminoacyl-tRNA synthetases, which affects a highly conserved amino acid in the helical domain of cytoplasmic AARS1. This disrupts the ability to charge tRNA with its corresponding amino acids, which leads to impaired protein synthesis. In AARS1, mutations are associated with both autosomal dominant and recessive forms of CMT2.

Trichothiodystrophy

In addition to its role in CMT2, mutations in the AARS1 gene have also been implicated in non-photosensitive trichothiodystrophy (NPS-TTD), a rare hereditary neurodevelopmental disorder. Trichothiodystrophy (TTD) is defined by sulfur-deficient brittle hair, nails, and scaly skin, but presents with variable clinical features. Unlike the photosensitive form of TTD (PS-TTD), which exhibits features of progressive neuropathy and accelerated aging, NPS-TTD is not associated with premature aging.

Research has identified AARS1, along with methionyl-tRNA synthetase 1 as genes in which variants can contribute to the development NPS-TTD. These variants lead to the instability of the respective enzymes which they encode, affecting the rate of tRNA charging, which is the first step in protein translation.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000090861Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000031960Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "AARS1 alanyl-tRNA synthetase 1 [Homo sapiens (human)] - Gene - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2024-11-25.
  6. Høyer H, Busk ØL, Esbensen QY, Røsby O, Hilmarsen HT, Russell MB, et al. (August 2022). "Clinical characteristics and proteome modifications in two Charcot-Marie-Tooth families with the AARS1 Arg326Trp mutation". BMC Neurology. 22 (1): 299. doi:10.1186/s12883-022-02828-6. PMC 9377087. PMID 35971119.
  7. Latour P, Thauvin-Robinet C, Baudelet-Méry C, Soichot P, Cusin V, Faivre L, et al. (January 2010). "A major determinant for binding and aminoacylation of tRNA(Ala) in cytoplasmic Alanyl-tRNA synthetase is mutated in dominant axonal Charcot-Marie-Tooth disease". American Journal of Human Genetics. 86 (1): 77–82. doi:10.1016/j.ajhg.2009.12.005. PMC 2801750. PMID 20045102.
  8. Nam DE, Park JH, Park CE, Jung NY, Nam SH, Kwon HM, et al. (March 2022). "Variants of aminoacyl-tRNA synthetase genes in Charcot-Marie-Tooth disease: A Korean cohort study". Journal of the Peripheral Nervous System. 27 (1): 38–49. doi:10.1111/jns.12476. PMID 34813128.
  9. ^ Botta E, Theil AF, Raams A, Caligiuri G, Giachetti S, Bione S, et al. (August 2021). "Protein instability associated with AARS1 and MARS1 mutations causes trichothiodystrophy". Human Molecular Genetics. 30 (18): 1711–1720. doi:10.1093/hmg/ddab123. PMC 8411986. PMID 33909043.
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