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ARFIP2

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Protein-coding gene in the species Homo sapiens

ARFIP2
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1I49, 1I4D, 1I4L, 1I4T, 4DCN

Identifiers
AliasesARFIP2, POR1, ADP ribosylation factor interacting protein 2
External IDsOMIM: 601638; MGI: 1924182; HomoloGene: 8234; GeneCards: ARFIP2; OMA:ARFIP2 - orthologs
Gene location (Human)
Chromosome 11 (human)
Chr.Chromosome 11 (human)
Chromosome 11 (human)Genomic location for ARFIP2Genomic location for ARFIP2
Band11p15.4Start6,474,683 bp
End6,481,479 bp
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)
Chromosome 7 (mouse)Genomic location for ARFIP2Genomic location for ARFIP2
Band7|7 E3Start105,283,410 bp
End105,289,623 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • olfactory zone of nasal mucosa

  • beta cell

  • body of pancreas

  • anterior pituitary

  • body of stomach

  • right uterine tube

  • trachea

  • rectum

  • minor salivary glands

  • right lobe of thyroid gland
Top expressed in
  • dentate gyrus of hippocampal formation granule cell

  • neural layer of retina

  • lacrimal gland

  • superior frontal gyrus

  • pyloric antrum

  • genital tubercle

  • parotid gland

  • ventricular zone

  • tail of embryo

  • cerebellar cortex
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

23647

76932

Ensembl

ENSG00000132254

ENSMUSG00000030881

UniProt

P53365

Q8K221

RefSeq (mRNA)

NM_001242854
NM_001242855
NM_001242856
NM_012402

NM_029802

RefSeq (protein)
NP_001229783
NP_001229784
NP_001229785
NP_036534
NP_001357335

NP_001357337
NP_001357338
NP_001357340
NP_001357341
NP_001357342
NP_001363487
NP_001363488
NP_001363489
NP_001363490
NP_001363491
NP_001363492
NP_001363493

NP_084078

Location (UCSC)Chr 11: 6.47 – 6.48 MbChr 7: 105.28 – 105.29 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Arfaptin-2 is a protein that in humans is encoded by the ARFIP2 gene.

Interactions

ARFIP2 has been shown to interact with Arf6, ARF3, ARF5 and RAC1.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000132254Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000030881Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Van Aelst L, Joneson T, Bar-Sagi D (August 1996). "Identification of a novel Rac1-interacting protein involved in membrane ruffling". The EMBO Journal. 15 (15): 3778–86. doi:10.1002/j.1460-2075.1996.tb00751.x. PMC 452058. PMID 8670882.
  6. ^ Kanoh H, Williger BT, Exton JH (February 1997). "Arfaptin 1, a putative cytosolic target protein of ADP-ribosylation factor, is recruited to Golgi membranes". The Journal of Biological Chemistry. 272 (9): 5421–9. doi:10.1074/jbc.272.9.5421. PMID 9038142.
  7. "Entrez Gene: ARFIP2 ADP-ribosylation factor interacting protein 2 (arfaptin 2)".
  8. D'Souza-Schorey C, Boshans RL, McDonough M, Stahl PD, Van Aelst L (September 1997). "A role for POR1, a Rac1-interacting protein, in ARF6-mediated cytoskeletal rearrangements". The EMBO Journal. 16 (17): 5445–54. doi:10.1093/emboj/16.17.5445. PMC 1170175. PMID 9312003.
  9. ^ Shin OH, Exton JH (August 2001). "Differential binding of arfaptin 2/POR1 to ADP-ribosylation factors and Rac1". Biochemical and Biophysical Research Communications. 285 (5): 1267–73. doi:10.1006/bbrc.2001.5330. PMID 11478794.
  10. Tarricone C, Xiao B, Justin N, Walker PA, Rittinger K, Gamblin SJ, Smerdon SJ (May 2001). "The structural basis of Arfaptin-mediated cross-talk between Rac and Arf signalling pathways". Nature. 411 (6834): 215–9. doi:10.1038/35075620. PMID 11346801. S2CID 4324211.

Further reading

External links

PDB gallery
  • 1i49: CRYSTAL STRUCTURE ANALYSIS OF ARFAPTIN 1i49: CRYSTAL STRUCTURE ANALYSIS OF ARFAPTIN
  • 1i4d: CRYSTAL STRUCTURE ANALYSIS OF RAC1-GDP COMPLEXED WITH ARFAPTIN (P21) 1i4d: CRYSTAL STRUCTURE ANALYSIS OF RAC1-GDP COMPLEXED WITH ARFAPTIN (P21)
  • 1i4l: CRYSTAL STRUCTURE ANALYSIS OF RAC1-GDP IN COMPLEX WITH ARFAPTIN (P41) 1i4l: CRYSTAL STRUCTURE ANALYSIS OF RAC1-GDP IN COMPLEX WITH ARFAPTIN (P41)
  • 1i4t: CRYSTAL STRUCTURE ANALYSIS OF RAC1-GMPPNP IN COMPLEX WITH ARFAPTIN 1i4t: CRYSTAL STRUCTURE ANALYSIS OF RAC1-GMPPNP IN COMPLEX WITH ARFAPTIN
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