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Acidaminococcus

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Genus of bacteria

Acidaminococcus
Scientific classification
Domain: Bacteria
Phylum: Bacillota
Class: Negativicutes
Order: Acidaminococcales
Family: Acidaminococcaceae
Genus: Acidaminococcus
Rogosa 1969
Type species
Acidaminococcus fermentans
Rogosa 1969
Species
  • A. fermentans
  • A. hominis
  • A. intestini
  • "A. massiliensis"
  • "A. provencensis"
  • "A. timonensis"

Acidaminococcus is a genus in the phylum Bacillota (Bacteria), whose members are anaerobic diplococci that can use amino acids as the sole energy source for growth. Like other members of the class Negativicutes, they are gram-negative, despite being Bacillota, which are normally gram-positive.

Etymology

The name Acidaminococcus derives from:
Neo-Latin noun acidum (from Latin adjective acidus, sour), an acid; Neo-Latin adjective aminus, amino; Neo-Latin masculine gender noun coccus (from Greek masculine gender noun kokkos (κόκκος), grain, seed), coccus-shaped; Neo-Latin masculine gender noun Acidaminococcus, the amino acid coccus.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI)

16S rRNA based LTP_08_2023 120 single copy marker proteins based GTDB 08-RS214

A. intestini

A. fermentans

A. hominis Abdugheni et al. 2023

A. intestini Jumas-Bilak et al. 2007

"A. provencensis" Takakura et al. 2019

"A. timonensis" Ricaboni et al. 2017

A. fermentans Rogosa 1969

"A. massiliensis" Ricaboni et al. 2017

See also

References

  1. ^ J.P. Euzéby. "Acidaminococcus". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
  2. Sayers; et al. "Acidaminococcus". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
  3. "The LTP". Retrieved 20 November 2023.
  4. "LTP_all tree in newick format". Retrieved 20 November 2023.
  5. "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
  6. "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  7. "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  8. "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
  9. Jumas-Bilak, E.; Carlier, J. -P.; Jean-Pierre, H.; Mory, F.; Teyssier, C.; Gay, B.; Campos, J.; Marchandin, H. (2007). "Acidaminococcus intestini sp. Nov., isolated from human clinical samples". International Journal of Systematic and Evolutionary Microbiology. 57 (10): 2314–2319. doi:10.1099/ijs.0.64883-0. PMID 17911303.
  10. "Approved Lists of Bacterial Names -- SKERMAN et al. 30 (1): 225 -- International Journal of Systematic Bacteriology". Archived from the original on 2009-09-04. Retrieved 2009-09-04.
Prokaryotes: Bacteria classification
Domain
Archaea
Bacteria
Eukaryota
(major groups
Excavata
Diaphoretickes
Hacrobia
Cryptista
Rhizaria
Alveolata
Stramenopiles
Plants
Amorphea
Amoebozoa
Opisthokonta
Animals
Fungi
Mesomycetozoea)
Terrabacteria
BV1, BV3, BV5
others
Cyanoprokaryota
Firmicutes
BV3
Low GC
  • Bacillota
  • Bacillota A
    • "Clostridiia"
    • "Thermoanaerobacteria"
    • "Thermosediminibacteria"
  • Bacillota D
  • Bacillota E
    • "Sulfobacillia"
    • "Symbiobacteriia"
    • "Thermaerobacteria"
  • Bacillota G
    • "Hydrogenisporia"
    • Limnochordia
  • "Desulfotomaculota"
    • "Carboxydocellia"
    • "Carboxydothermia"
    • "Dehalobacteriia"
    • "Desulfitobacteriia"
    • "Desulfotomaculia"
    • "Moorellia"
    • "Peptococcia"
    • "Syntrophomonadia"
    • "Thermincolia"
  • "Halanaerobiaeota"
  • "Selenobacteria"
CPR group
Thermotogida
Synergistetes
Thermocalda
Fusobacterida
Hydrobacteria
BV2, BV4
Clade 1
Clade 2
Spirochaeto
bacteriobiontes
PVC group
(Planctobacteria)
FCB group
(Sphingobacteria)
Proteobacteria
BV2
Aquificida
Deltaproteobacteria
others
others
Portal:
Taxon identifiers
Acidaminococcus


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