Caldithrix - Misplaced Pages

Genus of bacteria

Caldithrix
Scientific classification
Domain:	Bacteria
Phylum:	Calditrichota Kublanov et al. 2021
Class:	Calditrichia Kublanov et al. 2022
Order:	Calditrichales Kublanov et al. 2020
Family:	Calditrichaceae Kublanov et al. 2020
Genus:	Caldithrix Miroshnichenko et al. 2003
Type species
Caldithrix abyssi Miroshnichenko et al. 2003
Species
Caldithrix abyssi Caldithrix palaeochoryensis
Synonyms
Calditrichota: "Calditrichaeota" Kublanov et al. 2017 "Calditrichota" Youssef et al. 2019 "Calditrichae": "Calditrichia" Cavalier-Smith 2020

Caldithrix is a genus of thermophilic and anaerobic bacteria, currently assigned to its own phylum.

References

^ Miroshnichenko ML, Kostrikina NA, Chernyh NA, Pimenov NV, Tourova TP, Antipov AN, Spring S, Stackebrandt E, Bonch-Osmolovskaya EA. (2003). "Caldithrix abyssi gen. nov., sp. nov., a nitrate-reducing, thermophilic, anaerobic bacterium isolated from a Mid-Atlantic Ridge hydrothermal vent, represents a novel bacterial lineage". Int J Syst Evol Microbiol. 53 (Pt 1): 323–329. doi:10.1099/ijs.0.02390-0. PMID 12656191.
^ Kublanov IV, Sigalova OM, Gavrilov SN, Lebedinsky AV, Rinke C, Kovaleva O, Chernyh NA, Ivanova N, Daum C, Reddy TBK, Klenk H-P, Spring S, Göker M, Reva ON, Miroschnichenko ML, Kyrpides NC, Woyke T, Gelfand MS, Bonch-Osmolovskaya EA. (2017). "Genomic Analysis of Caldithrix abyssi, the Thermophilic Anaerobic Bacterium of the Novel Bacterial Phylum Calditrichaeota". Front Microbiol. 8: 195. doi:10.3389/fmicb.2017.00195. PMC 5317091. PMID 28265262.
^ Oren A, Garrity GM. (2020). "Validation list no. 193. List of new names and new combinations previously effectively, but not validly, published". Int J Syst Evol Microbiol. 70 (5): 2960–2966. doi:10.1099/ijsem.0.004156. PMID 32471528. S2CID 219103834.
Parte, A.C. "Caldithrix". LPSN.
Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi:10.1099/ijsem.0.005056. PMID 34694987. S2CID 239887308.

Prokaryotes: Bacteria classification

(major groups

Terrabacteria
BV1, BV3, BV5

others	Actinomycetota Acidimicrobiia Actinomycetia "Aquicultoria" Coriobacteriia "Geothermincolia" "Humimicrobiia" Rubrobacteria Thermoleophilia "Bipolaricaulota" "Bipolaricaulia" Chloroflexota "Caldilineia" Chloroflexia Dehalococcoidia Ktedonobacteria "Limnocylindria" Deinococcota "Deinococcia" "Dormiibacterota" "Dormibacteria" Armatimonadota "Abditibacteriia" Armatimonadia Chthonomonadia Fimbriimonadia "Heboniibacteriia" "Zipacnadia" "Eremiobacterota" "Eudoremicrobiia" "Xenobiia" "Eremiobacteria"
Cyanoprokaryota	Cyanobacteriota Cyanobacteria "Sericytochromatia" "Vampirovibrionophyceae" "Margulisiibacteriota" "Marinamargulisbacteria" "Riflemargulisbacteria" "Saganbacteria" "Termititenacia"
Firmicutes BV3 Low GC	Bacillota "Bacillia" Bacillota A "Clostridiia" "Thermoanaerobacteria" "Thermosediminibacteria" Bacillota D "Dethiobacteria" "Natranaerobiia" "Proteinivoracia" Bacillota E "Sulfobacillia" "Symbiobacteriia" "Thermaerobacteria" Bacillota G "Hydrogenisporia" Limnochordia "Desulfotomaculota" "Carboxydocellia" "Carboxydothermia" "Dehalobacteriia" "Desulfitobacteriia" "Desulfotomaculia" "Moorellia" "Peptococcia" "Syntrophomonadia" "Thermincolia" "Halanaerobiaeota" "Halanaerobiia" "Selenobacteria" "Selenomonadia"

CPR group

"Elulota"
- "Elulimicrobia"
"Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"

Thermotogida

Synergistetes	Atribacterota Atribacteria Synergistota Synergistia
Thermocalda	Caldisericota Caldisericia Coprothermobacterota Coprothermobacteria Dictyoglomerota Dictyoglomeria "Lithacetigenota" "Lithacetigenia" "Thermodesulfobiota" "Thermodesulfobiia" Thermotogota "Thermotogia"

Fusobacterida

Fusobacteriota
- Fusobacteriia
"Macinerneyibacteriota"
- "Macinerneyibacteriia"
"Muiribacteriota"
- "Muiribacteriia"
"Rifleibacteriota"
- "Ozemibacteria"
"Walliibacteriota"

Hydrobacteria
BV2, BV4

Clade 1

"Aerophobota"
- "Aerophobia"
"Auribacterota"
- "Ancaeobacteria"
- "Auribacteria"
- "Erginobacteria"
- "Tritonobacteria"
"Desantisiibacteriota"
Elusimicrobiota
- Elusimicrobiia
- Endomicrobiia
"Firestoneibacteriota"
"Goldiibacteriota"
"Omnitrophota"
- "Omnitrophia"
- "Velamenicoccia"
"Ratteibacteriota"

Clade 2

"Abyssubacteria"
"Hinthialibacterota"
- "Hinthialibacteria"
"Hydrogenedentota"
- "Hydrogenedentia"
"Poribacteriota"
"Saltatorellota"
- "Saltatorellae"
"Sumerlaeota"
- "Sumerlaeia"

Spirochaeto
bacteriobiontes

"Babelota"
- "Babeliae"
"Lindowiibacteriota"
Spirochaetota
- "Brevinematia"
- "Brachyspirae"
- "Exilispiria"
- "Leptospiria"
- "Spirochaetia"

PVC group
(Planctobacteria)

Chlamydiota
- Chlamydiia
Planctomycetota
- "Brocadiia"
- Phycisphaeria
- Planctomycetia
- "Uabimicrobiia"
Verrucomicrobiota
- Kiritimatiellia
- Lentisphaeria
- Verrucomicrobiia

FCB group
(Sphingobacteria)

Bacteroidota
- Bacteroidia
- Chlorobiia
- "Ignavibacteriia"
- "Kapabacteria"
- "Kryptoniia"
- Rhodothermia
Calditrichota
- Calditrichia
"Cloacimonadota"
- "Cloacimonadia"
"Coatesiibacteriota"
"Cosmopoliota"
- "Cosmopolitia"
"Delongiibacteriota"
"Edwardsiibacteriota"
"Eiseniibacteriota"
"Electryoneota"
- "Electryoneia"
- "Tariuqbacteria"
"Fermentibacterota"
- "Fermentibacteria"
Fibrobacterota
- Chitinivibrionia
- Fibrobacteria
- "Raymondbacteriia"
Gemmatimonadota
- Gemmatimonadia
- "Glassbacteria"
"Heilongiota"
- "Heilongiia"
"Hydrothermota"
- "Hydrothermia"
- "Stahlbacteria"
"Krumholzibacteriota"
- "Krumholzibacteriia"
"Latescibacterota"
- "Handelsmanbacteria"
- "Latescibacteria"
"Neomarinimicrobiota"
"Marinisomatota"
- "Marinisomatia"
"Tianyaibacteriota"
"Zixiibacteriota"

Proteobacteria
BV2

Aquificida	"Acidulodesulfobacteriota" "Acidulodesulfobacteriia" Aquificota Aquificia "Desulfurobacteriia" Campylobacterota "Campylobacteria" Desulfurellia "Calescibacteriota" "Calescibacteriia" Chrysiogenota Chrysiogenia "Dadaibacteriota" "Dadabacteria" Deferribacterota "Deferribacteria" Desulfobacterota G Syntrophorhabdia "Thermosulfidibacterota" "Thermosulfidibacteria"
Deltaproteobacteria	Bdellovibrionota Bacteriovoracia Bdellovibrionia Oligoflexia "Binatota" "Binatia" "Deferrimicrobiota" "Anaeroferrophilia" "Deferrimicrobiia" "Deferrisomatota" Deferrisomatia "Desulfuromonadota" Desulfuromonadia "Lernaellota" "Lernaellia" "Methylomirabilota" "Methylomirabilia" "Moduliflexota" "Moduliflexia" Myxococcota Myxococcia "Bradymonadia" Polyangiia Nitrospinota Nitrospinia Nitrospirota Nitrospiria "Thermodesulfovibrionia" SAR324 "Lambdaproteobacteria" "Schekmaniibacteriota" "Tectimicrobiota" "Entotheonellia" "Thermodesulfobacteriota"
others	Acidobacteriota "Acidobacteriia" "Aminicenantia" Blastocatellia "Fischerbacteria" "Guanabaribacteriia" "Holophagia" "Polarisedimenticolia" Thermoanaerobaculia Vicinamibacteria "Canglongiota" "Canglongiia" "Leptospirillaeota" "Leptospirillia" Pseudomonadota "Caulobacteria" "Mariprofundia" "Magnetococcia" "Pseudomonadia"

others

Source: Bergey's Manual (2001–2012)
Alternative views: Wikispecies

Taxon identifiers
Caldithrix	Wikidata: Q5019101 Wikispecies: Caldithrix CoL: 62J7Q EoL: 97728 GBIF: 3219768 IRMNG: 1262692 ITIS: 956889 LPSN: caldithrix NCBI: 187144 Open Tree of Life: 4019026 WoRMS: 1261855
Calditrichaceae	Wikidata: Q123437088 GBIF: 10500553 IRMNG: 11908370 LPSN: calditrichaceae NCBI: 1962854
Calditrichales	Wikidata: Q123437089 GBIF: 10842454 LPSN: calditrichales NCBI: 1962852
Calditrichia	Wikidata: Q123437090 GBIF: 10698682 LPSN: calditrichia NCBI: 1962850
Calditrichota	Wikidata: Q56704336 GBIF: 10874215 LPSN: calditrichota NCBI: 1930617

Categories: