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Ci protein

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Zinc finger containing transcription factor

Ci protein, short for Cubitus interruptus, is a zinc finger containing transcription factor involved in the Hedgehog signaling pathway. In the absence of a signal to the Hedgehog signaling pathway, the Ci protein is cleaved and destroyed in proteasomes. It isn't, however, completely destroyed; part of the protein survives and acts as a repressor in the nucleus, keeping genes responsive to the Hedgehog signal silent.

Degradation of Ci

The degradation of Ci protein depends on a large multiprotein complex, which contains a serine/threonine kinase of unknown function, an anchoring protein that binds to microtubules (to keep the Ci protein out of the nucleus) and an adaptor protein. When the Hedgehog signaling pathway is turned on, the Ci proteolysis is suppressed and the unprocessed CI protein enters the nucleus, where it activates the transcription of its target genes. Ci undergoes complete or partial degradation in the cells, the detailed molecular mechanism is poorly understood. It has been reported that an AAA ATPase Ter94 complex and K11/K48 ubiquitin chains are involved in the selection of Ci degradation.

Target genes

References

  1. Von Ohlen T, Lessing D, Nusse R, Hooper JE (March 1997). "Hedgehog signaling regulates transcription through cubitus interruptus, a sequence-specific DNA binding protein". Proc. Natl. Acad. Sci. U.S.A. 94 (6): 2404–9. Bibcode:1997PNAS...94.2404V. doi:10.1073/pnas.94.6.2404. PMC 20100. PMID 9122207.
  2. Cohen MM (November 2003). "The hedgehog signaling network". Am. J. Med. Genet. A. 123 (1): 5–28. doi:10.1002/ajmg.a.20495. PMID 14556242. S2CID 31906029.
  3. Jiang J (September 2002). "Degrading Ci: who is Cul-pable?". Genes Dev. 16 (18): 2315–21. doi:10.1101/gad.1027902. PMID 12231619.
  4. Zhang, Zhao; Lv, Xiangdong; Yin, Wen-chi; Zhang, Xiaoyun; Feng, Jing; Wu, Wenqing; Hui, Chi-chung; Zhang, Lei; Zhao, Yun (2013-06-24). "Ter94 ATPase complex targets k11-linked ubiquitinated ci to proteasomes for partial degradation". Developmental Cell. 25 (6): 636–644. doi:10.1016/j.devcel.2013.05.006. ISSN 1878-1551. PMID 23747190.
  5. Hepker J, Wang QT, Motzny CK, Holmgren R, Orenic TV (January 1997). "Drosophila cubitus interruptus forms a negative feedback loop with patched and regulates expression of Hedgehog target genes". Development. 124 (2): 549–58. doi:10.1242/dev.124.2.549. PMID 9053330.

External links

Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies
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