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NSUN2

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Protein-coding gene in the species Homo sapiens
NSUN2
Identifiers
AliasesNSUN2, MISU, MRT5, SAKI, TRM4, NOP2/Sun RNA methyltransferase family member 2, NOP2/Sun RNA methyltransferase 2
External IDsOMIM: 610916; MGI: 107252; HomoloGene: 9817; GeneCards: NSUN2; OMA:NSUN2 - orthologs
Gene location (Human)
Chromosome 5 (human)
Chr.Chromosome 5 (human)
Chromosome 5 (human)Genomic location for NSUN2Genomic location for NSUN2
Band5p15.31Start6,599,239 bp
End6,633,291 bp
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)
Chromosome 13 (mouse)Genomic location for NSUN2Genomic location for NSUN2
Band13 B3|13 35.55 cMStart69,681,865 bp
End69,783,899 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • skin of arm

  • right uterine tube

  • secondary oocyte

  • right lobe of liver

  • skin of abdomen

  • appendix

  • skin of leg

  • lymph node

  • pancreatic epithelial cell

  • spleen
Top expressed in
  • otic placode

  • otic vesicle

  • tail of embryo

  • epiblast

  • saccule

  • Ileal epithelium

  • primitive streak

  • abdominal wall

  • genital tubercle

  • hair follicle
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

54888

28114

Ensembl

ENSG00000037474

ENSMUSG00000021595

UniProt

Q08J23

Q1HFZ0

RefSeq (mRNA)

NM_001193455
NM_017755

NM_145354

RefSeq (protein)

NP_001180384
NP_060225

NP_663329

Location (UCSC)Chr 5: 6.6 – 6.63 MbChr 13: 69.68 – 69.78 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

NOP2/Sun domain family, member 2 is a protein that in humans is encoded by the NSUN2 gene. Alternatively spliced transcript variants encoding different isoforms have been noted for the gene.

Function

The protein is a methyltransferase that catalyzes the methylation of cytosine to 5-methylcytosine (m5C) at position 34 of intron-containing tRNA (Leu)(CAA) precursors. This modification is necessary to stabilize the anticodon-codon pairing and correctly translate the mRNA. NSUN2 is also localized on mitochondria and is capable of introducing post-transcriptional modifications in mitochondrial tRNAs.

Clinical relevance

Mutations in this gene have been found associated to cases of Dubowitz-like syndrome.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000037474Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000021595Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "NOP2/Sun domain family, member 2". Retrieved 2011-12-04.
  6. Shinoda S, Kitagawa S, Nakagawa S, Wei FY, Tomizawa K, Araki K, et al. (July 2019). "Mammalian NSUN2 introduces 5-methylcytidines into mitochondrial tRNAs". Nucleic Acids Research. 47 (16): 8734–8745. doi:10.1093/nar/gkz575. PMC 6895283. PMID 31287866.
  7. Van Haute L, Lee SY, McCann BJ, Powell CA, Bansal D, Vasiliauskaitė L, et al. (July 2019). "NSUN2 introduces 5-methylcytosines in mammalian mitochondrial tRNAs". Nucleic Acids Research. 47 (16): 8720–8733. doi:10.1093/nar/gkz559. PMC 6822013. PMID 31276587.
  8. Martinez FJ, Lee JH, Lee JE, Blanco S, Nickerson E, Gabriel S, et al. (June 2012). "Whole exome sequencing identifies a splicing mutation in NSUN2 as a cause of a Dubowitz-like syndrome". Journal of Medical Genetics. 49 (6): 380–5. doi:10.1136/jmedgenet-2011-100686. PMC 4771841. PMID 22577224.

Further reading

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