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After Lilly's car accident, she returns and investigates the disappearance of 24-year-old Darcy Curtis aboard a magnificent ocean liner in 1966. Long assumed to be a suicide, the case is re-investigated as a homicide when her remains are recovered. Meanwhile, Moe's release on bail surprises everyone.

• All songs in this episode are by Ray Charles.
• Song featured in the intro: "I Got a Woman" by Ray Charles.
• Song featured in the finale: "What Would I Do Without You?" by Ray Charles.

The team re-examines the 1995 murder of homeless 17-year-old amateur skateboarding prodigy Nash Simpson, who was trying to earn enough money through skating sponsors to get himself off the street, after his brother identifies his belongings upon arriving in Philadelphia.

• Song featured in the intro: "Feel the Pain", by Dinosaur Jr.
• Song featured in the finale: "Disarm" by The Smashing Pumpkins.

The 2004 case of Alex Caceres, a 17-year-old boy who was murdered while wrongfully imprisoned in a juvenile detention center, is reopened after new evidence suggests that he was innocent. Scotty is determined to bring justice to the victim, having been attempting to free Alex prior to his death. Meanwhile, Stillman is forced to transfer personnel out of his department.

• Song featured in the intro: "In This World", by Moby.
• Song featured in the finale: "None of Us Are Free" by Solomon Burke.

The team reinvestigates the 1970 murder of Billy Sanders, a 20-year-old virtuoso jazz musician who was keeping his hard-partying lifestyle secret from his devoutly religious father, when his son arrives wanting to know more about him, having been born after his death.

• Song featured in the finale: "I'll Be Around" by The Spinners.

The team reopens the 1944 disappearance and murder of Vivian Lynn, a 22-year-old female pilot who was part of a civilian program to aid the Army Air Forces during World War II and was a professional fighter pilot. The team discovers that the plane she was flying in was sabotaged and must comb through the personnel at the base she worked at to find the culprit.

• Song featured in the intro: "Wild Blue Yonder"
• Song featured in the finale: "I'll Walk Alone" by Martha Tilton.

When the remains of Sonny Sandoval, a 45-year-old jockey who had been missing since 1986, are uncovered in an old horse grave, the team reexamines the circumstances of his disappearance. They soon discover that not only was Sonny retiring after his last race, but his personal life was going off the rails.

• All songs in this episode are by Santana.
• Song featured in the intro: "Oye Como Va" by Santana.
• Song featured in the finale: "Samba Pa Ti" by Santana.

The team reinvestigates the 1991 murder of Donalyn Sullivan, a 14-year-old aspiring rapper who was in foster care with her younger sister at the time of her death, when a convict discloses information that leads them to the primary crime scene. When the team stumbles upon her songbook, they discover that the lyrics could be the key to catching her killer.

• Song featured in the intro: "Sing a Song" by Earth Wind and Fire
• Song featured in the finale: "Read Between the Lines" written by Jeff Moonie Jr. and performed by Danièle Watts.

When a Chinese woman discloses new information about her son's death, which Stillman worked on, the team reopens the 1983 murder of Jack Chao Lu, a 17-year-old Chinese-American boy whose death may have been connected to the killing of his girlfriend, a 17-year-old Vietnamese girl named Tam Sung, by Chinese gang members three months prior. However, they are hindered by the prejudiced community and a retired officer who appears to know more than he's letting on.

• Song featured in the intro: "Age of Consent", by New Order.
• Song featured in the finale: "Every Breath You Take" by The Police.

The team investigates the 1999 murder of Luke Cronin, an 18-year-old debater who supposedly committed suicide after losing his first debate at his new prep school, when new evidence points to his death being staged.

• Song featured in the intro: "All Star", by Smash Mouth.
• Song featured in the finale: "Karma Police" by Radiohead.

The team reopens the 1980 murder of Tommy Flanagan, an 18-year-old ice hockey player who was murdered on his team's ice rink on the same night the U.S. hockey team defeated the Soviet Union at the Winter Olympics, after the prime suspect comes forward with a viable alibi on the night the victim died. The only clue the team has on them is a broken hockey stick, so they must go through the victim's former teammates to find the culprit.

• All songs in this episode are by Bob Seger.
• Song featured in the intro: "Ramblin' Gamblin' Man" by Bob Seger.
• Song featured in the finale: "Against the Wind" by Bob Seger.

The team investigates the 2005 murder of Mike Donley, a 28-year-old Army recruiter who was killed two days before his deployment to Iraq, and uncover evidence that he may have been involved in a pawnshop burglary that occurred the same night he was killed.

• Song featured in the intro: "I Don't Wanna Be", by Gavin DeGraw.
• Song featured in the finale: "Politik" by Coldplay.

The team reopens the case of Harry Denton, a private investigator who was murdered in 1974 while working to track down a teenage runaway, when his bones are found in the cement foundations of a demolished building.

• Song featured in the intro: "Any Major Dude Will Tell You" by Steely Dan.
• Song featured in the finale: "Forever Young" by Bob Dylan.

The team reinvestigates the 1982 murder of Carlos Espinosa, a talented 16-year-old graffiti artist who was killed by a fatal overdose of toxic paint, when his mother comes forward with his black book containing unfinished pieces of art, and soon discover a graffiti group that was harassing local artists.

• Song featured in the intro: "You Dropped a Bomb on Me" by The Gap Band.
• Song featured in the finale: "Since You're Gone" by The Cars.

The team reinvestigates the 1971 death of Mia Romanov, an 18-year-old circus aerialist when another circus performer comes forward with new evidence that indicates the girl was dead before the accident that supposedly killed her took place. Meanwhile, Lilly comes under investigation by Internal Affairs after Moe Kitchener, the man who tried to kill her, is found murdered outside a bar in his car.

• All songs in this episode are by The Doors.
• Song featured in the intro: "Light My Fire", by The Doors.
• Song featured in the finale: "People Are Strange" by The Doors.

The resident police expert on fires and explosions, Louie Amante, is going to marry a woman whose previous fiancé, Dan Palmer, mysteriously died in 2008 after calling off their wedding. The team reopens the man's case to make sure that their colleague isn't about to marry a murderer; however, they quickly discover that there are more suspects than they thought, while the groom had secrets of his own.

• Song featured in the intro: "Sweet Thing", by Keith Urban.
• Song featured in the finale: "Out Last Night" by Kenny Chesney.

The team reopens the case of Mick "The Machine" Malone, a 28-year-old dock worker and young father who was moonlighting as an indy-circuit wrestler until he was shot dead in 1986, when the gun used to kill him is recovered. The team discovers Mick's wrestling career was putting a strain on his relationship with his son and ex-wife. Meanwhile, Valens secretly looks into a lead on the man who mugged and raped his mother.

• Song featured in the intro: "Livin' on a Prayer", by Bon Jovi.
• Song featured in the finale: "Wanted Dead or Alive" by Bon Jovi.

Realizing that the missing Vera has finally hit rock bottom, his worried team members hope that a new twist to a 2006 arson case that killed two boys and brothers, which he was secretly obsessing about in recent weeks, might supply leads to his whereabouts. They soon find that the guilty man and the boys’ father, Joe Don Billingsley, was murdered and after reviewing the case, learns that he may not have been guilty as they thought.

• All songs in this episode are by Pink Floyd.
• Song featured in the intro: "Comfortably Numb" by Pink Floyd
• Song featured in the finale: "Wish You Were Here" by Pink Floyd.

When ballistics tie a recent murder case of Rush's to a serial killer who has been inactive since 1983, a tough FBI agent with ties to Stillman shows up to enlist the team's aid in finding the killer who has eluded her for 27 years.

• Song featured in the intro: "Just What I Needed", by The Cars.
• Song featured in the finale: N/A

After determining the serial killer's identity - and some of his likely future targets - the team and the FBI work together to apprehend him while trying to locate and protect the people he's preparing to kill.

• Song featured in the intro: "Snake Song" by Townes Van Zandt
• Song featured in the finale: "Keepsake" by State Radio.

An attraction grows between Rush and FBI agent Ryan Cavanaugh as they travel to upstate New York to investigate the 1969 murder of David Quinn, a soldier who attended Woodstock; the two discover the victim may have been involved with a state senator who attended Woodstock as well. Back in Philadelphia, Vera reconnects with his ex-girlfriend from high school when she asks him to investigate a break-in that occurred at her home.

• Song featured in the intro: "Darlin' Be Home Soon by Joe Cocker.
• Song featured in the finale: "The Weight" by The Band.

The team reopens the 1989 case of Felicia Grant, a 17-year-old high school senior who was killed in a hit-and-run shortly after she was crowned prom queen, when photos from an old camera reveal that she was killed just 15 minutes after prom. Meanwhile, Rush gets some disturbing news about her sister, Christina.

• Songs featured in the intro: "Bust a Move", by Young MC / "Almost Paradise", by Mike Reno and Ann Wilson.
• Song featured in the finale: "All I Want Is You by U2.

While Rush and Valens leave Philadelphia to find Rush's missing sister, Christina, Jeffries gets a lead in the 1993 murder of Wanda Johnson, a 15-year-old girl who was shot to death and dumped in a seedy part of the city. He and his team work on the case, hoping to fulfill the promise he made to her parents to find the killer.

• All songs in this episode are by The Rolling Stones.
• Song featured in the finale: "Winter" by The Rolling Stones.

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• CSI franchise