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Sp3 transcription factor

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(Redirected from SP3 (gene)) Protein-coding gene in the species Homo sapiens
SP3
Identifiers
AliasesSP3, SPR2, Sp3 transcription factor
External IDsOMIM: 601804; MGI: 1277166; HomoloGene: 7952; GeneCards: SP3; OMA:SP3 - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)
Chromosome 2 (human)Genomic location for SP3Genomic location for SP3
Band2q31.1Start173,880,850 bp
End173,965,373 bp
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)
Chromosome 2 (mouse)Genomic location for SP3Genomic location for SP3
Band2|2 C3Start72,766,771 bp
End72,810,790 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • hair follicle

  • germinal epithelium

  • sural nerve

  • superficial temporal artery

  • mucosa of paranasal sinus

  • Achilles tendon

  • buccal mucosa cell

  • skin of hip

  • palpebral conjunctiva

  • ventricular zone
Top expressed in
  • granulocyte

  • genital tubercle

  • left lung lobe

  • migratory enteric neural crest cell

  • hand

  • thymus

  • atrium

  • dermis

  • left colon

  • ciliary body
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6670

20687

Ensembl

ENSG00000172845

ENSMUSG00000027109

UniProt

Q02447
Q86TP0

O70494

RefSeq (mRNA)

NM_003111
NM_001017371
NM_001172712

NM_001018042
NM_001098425
NM_011450

RefSeq (protein)

NP_001017371
NP_001166183
NP_003102
NP_003102.1

NP_001018052
NP_001091895

Location (UCSC)Chr 2: 173.88 – 173.97 MbChr 2: 72.77 – 72.81 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse
Not to be confused with Sp³ bond.

Sp3 transcription factor, also known as SP3, refers to both a protein and the gene it is encoded by.

This gene belongs to a family of Sp1 related genes that encode transcription factors that regulate transcription by binding to consensus GC- and GT-box regulatory elements in target genes. This protein contains a zinc finger DNA-binding domain and several transactivation domains, and has been reported to function as a bifunctional transcription factor that either stimulates or represses the transcription of numerous genes. Transcript variants encoding different isoforms have been described for this gene, and one has been reported to initiate translation from a non-AUG (AUA) start codon. Additional isoforms, resulting from the use of alternate downstream translation initiation sites, have also been noted.

Interactions

Sp3 transcription factor has been shown to interact with Histone deacetylase 2, PIAS1, E2F1 and GABPA.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000172845Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000027109Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "Entrez Gene: SP3 Sp3 transcription factor".
  6. Won, Jaejoon; Yim Jeongbin; Kim Tae Kook (October 2002). "Sp1 and Sp3 recruit histone deacetylase to repress transcription of human telomerase reverse transcriptase (hTERT) promoter in normal human somatic cells". J. Biol. Chem. 277 (41): 38230–8. doi:10.1074/jbc.M206064200. ISSN 0021-9258. PMID 12151407.
  7. Sun, Jian-Min; Chen Hou Yu; Moniwa Mariko; Litchfield David W; Seto Edward; Davie James R (September 2002). "The transcriptional repressor Sp3 is associated with CK2-phosphorylated histone deacetylase 2". J. Biol. Chem. 277 (39): 35783–6. doi:10.1074/jbc.C200378200. ISSN 0021-9258. PMID 12176973.
  8. Sapetschnig, Alexandra; Rischitor Grigore; Braun Harald; Doll Andreas; Schergaut Marion; Melchior Frauke; Suske Guntram (October 2002). "Transcription factor Sp3 is silenced through SUMO modification by PIAS1". EMBO J. 21 (19): 5206–15. doi:10.1093/emboj/cdf510. ISSN 0261-4189. PMC 129032. PMID 12356736.
  9. Rotheneder, H; Geymayer S; Haidweger E (November 1999). "Transcription factors of the Sp1 family: interaction with E2F and regulation of the murine thymidine kinase promoter". J. Mol. Biol. 293 (5): 1005–15. doi:10.1006/jmbi.1999.3213. ISSN 0022-2836. PMID 10547281.
  10. Galvagni, F; Capo S; Oliviero S (March 2001). "Sp1 and Sp3 physically interact and co-operate with GABP for the activation of the utrophin promoter" (PDF). J. Mol. Biol. 306 (5): 985–96. doi:10.1006/jmbi.2000.4335. hdl:2318/141203. ISSN 0022-2836. PMID 11237613.

Further reading

PDB gallery
  • 1va1: Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 1) 1va1: Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 1)
Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies


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