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TMEM38A

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Monovalent cation channel
TMEM38A
Identifiers
AliasesTMEM38A, TRIC-A, TRICA, transmembrane protein 38A
External IDsOMIM: 611235; MGI: 1921416; HomoloGene: 11449; GeneCards: TMEM38A; OMA:TMEM38A - orthologs
Gene location (Human)
Chromosome 19 (human)
Chr.Chromosome 19 (human)
Chromosome 19 (human)Genomic location for TMEM38AGenomic location for TMEM38A
Band19p13.11Start16,661,139 bp
End16,690,023 bp
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)
Chromosome 8 (mouse)Genomic location for TMEM38AGenomic location for TMEM38A
Band8|8 B3.3Start72,572,055 bp
End72,587,282 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • muscle of thigh

  • gastrocnemius muscle

  • quadriceps femoris muscle

  • vastus lateralis muscle

  • skeletal muscle tissue

  • tibialis anterior muscle

  • Skeletal muscle tissue of rectus abdominis

  • deltoid muscle

  • biceps brachii

  • Skeletal muscle tissue of biceps brachii
Top expressed in
  • interventricular septum

  • muscle of thigh

  • skeletal muscle tissue

  • medial head of gastrocnemius muscle

  • triceps brachii muscle

  • quadriceps femoris muscle

  • tibialis anterior muscle

  • temporal muscle

  • sternocleidomastoid muscle

  • vastus lateralis muscle
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

79041

74166

Ensembl

ENSG00000072954

ENSMUSG00000031791

UniProt

Q9H6F2

Q3TMP8

RefSeq (mRNA)

NM_024074

NM_144534

RefSeq (protein)

NP_076979

NP_653117
NP_001344207
NP_001344208
NP_001344209
NP_001344213

Location (UCSC)Chr 19: 16.66 – 16.69 MbChr 8: 72.57 – 72.59 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Trimeric intracellular cation-selective channel A (TRIC-A) is a monovalent cation channel in the SR and nuclear membranes of skeletal muscle cells, encoded by the transmembrane protein 38A (TMEM38A) gene. It is one of two known TRIC proteins, the other being TRIC-B.

Structure

TRIC-A is a 33kDa transmembrane protein, expressed predominantly in excitable tissues including skeletal muscle and brain. Its N-terminal region is located in the SR lumen or within the nucleus while its C-terminal region projects into the cytoplasm. In situ, TRIC-A forms homo-trimers, producing its "bullet-shaped" three-dimensional structure (see Venturi et al. (2012), Figure 1 for a three-dimensional rendering of TRIC-A).

Function

TRIC-A is permeable to both Na and K but not divalent cations like Ca. The channel exhibits marked voltage-dependence, becoming more open when the cytosol is more positively charged than the ER lumen. TMEM38A-knockout mice exhibit reduced Ryanodine receptor 1-mediated Ca release; as such, K flux into the SR through TRIC-A is thought to support RyR1-mediated efflux of Ca ions from the sarcoplasmic reticulum into the cytosol. These knockouts also develop hypertension during early adulthood, whereas transgenic mice overexpressing TRIC-A develop hypotension. These results are thought to reflect a role for TRIC-A in the excitability of vascular smooth muscle cells.

Clinical significance

TRIC-A has been implicated in the regulation of arterial blood pressure through regulating the excitability of vascular smooth muscle cells. Several single-nucleotide polymorphisms (SNPs) in close proximity to the TRIC-A locus increase the risk of hypertension and reduce the efficiency of antihypertensive drugs in its treatment. Such SNPs are in positive linkage disequilibrium with TRIC-A, meaning they are unlikely to be separated by genetic recombination and so are more frequently inherited together from the same parent chromosome. As such, TRIC-A SNPs can provide biomarkers for the diagnosis of essential hypertension and, in future, may help to determine which treatments may be most well-suited to a given individual (see personalized medicine).

See also

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000072954Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000031791Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Venturi, Elisa; Sitsapesan, Rebecca; Yamazaki, Daiju; Takeshima, Hiroshi (15 December 2012). "TRIC channels supporting efficient Ca2+ release from intracellular stores". European Journal of Physiology. 465 (2): 187–195. doi:10.1007/s00424-012-1197-5. PMID 23242030. S2CID 14397400.
  6. Cabral, Wayne A.; Ishikawa, Masaki; Garten, Matthias; Makareeva, Elena N.; Sargent, Brandi M.; Weis, MaryAnn; Barnes, Aileen M.; Webb, Emma A.; Shaw, Nicholas J.; Ala-Kokko, Leena; Lacbawan, Felicitas L.; Högler, Wolfgang; Leikin, Sergey; Blank, Paul S.; Zimmerberg, Joshua; Eyre, David R.; Yamada, Yoshihiko; Marini, Joan C. (21 July 2016). "Absence of the ER Cation Channel TMEM38B/TRIC-B Disrupts Intracellular Calcium Homeostasis and Dysregulates Collagen Synthesis in Recessive Osteogenesis Imperfecta". PLOS Genetics. 12 (7): e1006156. doi:10.1371/journal.pgen.1006156. PMC 4956114. PMID 27441836.
  7. ^ Yazawa, Masayuki; Ferrante, Christopher; Feng, Jue; Mio, Kazuhiro; Ogura, Toshihiko; Zhang, Miao; Lin, Pei-Hui; Pan, Zui; Komazaki, Shinji; Kato, Kazuhiro; Nishi, Miyuki; Zhao, Xiaoli; Weisleder, Noah; Sato, Chikara; Ma, Jianjie; Takeshima, Hiroshi (5 July 2007). "TRIC channels are essential for Ca2+ handling in intracellular stores". Nature. 448 (7149): 78–82. Bibcode:2007Natur.448...78Y. doi:10.1038/nature05928. PMID 17611541. S2CID 4431703.
  8. Yamazaki, Daiju; Tabara, Yasuharu; Kita, Satomi; Hanada, Hironori; Komazaki, Shinji; Naitou, Daisuke; Mishima, Aya; Nishi, Miyuki; Yamamura, Hisao; Yamamoto, Shinichiro; Kakizawa, Sho; Miyachi, Hitoshi; Yamamoto, Shintaro; Miyata, Toshiyuki; Kawano, Yuhei; Kamide, Kei; Ogihara, Toshio; Hata, Akira; Umemura, Satoshi; Soma, Masayoshi; Takahashi, Norio; Imaizumi, Yuji; Miki, Tetsuro; Iwamoto, Takahiro; Takeshima, Hiroshi (3 August 2011). "TRIC-A Channels in Vascular Smooth Muscle Contribute to Blood Pressure Maintenance". Cell Metabolism. 14 (2): 231–241. doi:10.1016/j.cmet.2011.05.011. hdl:2433/143634. PMID 21803293.
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