Tectiviridae | |
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CryoEM model of Enterobacteria phage PRD1 capsid. PDB entry 1gw7 | |
Virus classification | |
(unranked): | Virus |
Realm: | Varidnaviria |
Kingdom: | Bamfordvirae |
Phylum: | Preplasmiviricota |
Class: | Tectiliviricetes |
Order: | Kalamavirales |
Family: | Tectiviridae |
Genera | |
Tectiviridae is a family of viruses with 10 species in five genera. Bacteria serve as natural hosts. Tectiviruses have no head-tail structure, but are capable of producing tail-like tubes of ~ 60×10 nm upon adsorption or after chloroform treatment. The name is derived from Latin tectus (meaning 'covered').
Virology
The virions of Tectiviridae species are non-enveloped, icosahedral and display a pseudo T=25 symmetry. The capsid has two layers. The outer layer is a protein structure of 240 capsid proteins trimers, and the inner one is a proteinaceous lipid membrane which envelopes the virus genome. Apical spikes extending about 20 nanometers (nm) protrude from the icosahedrons vertices.
The genome is a single molecule of linear double-stranded DNA of 15 kilobases in length, and has 30 open reading frames. It forms a tightly packed coil and encodes several structural proteins. It encodes about 30 proteins that are transcribed in operons. At least 9 structural proteins are present in the viron. The genome is about 66 megadaltons in weight and constitutes 14–15% of the virion by weight. Lipids constitute a further 15% by weight. Carbohydrates are not present.
Life cycle
Viral replication is cytoplasmic. Entry into the host cell is achieved by adsorption into the host cell. After adsorption to the host cell surface the virion extrudes a tail-tube structure through a vertex for genome delivery into the host. Replication follows the DNA strand displacement model. DNA-templated transcription is the method of transcription. Capsid proteins polymerize around a lipoprotein vesicle translocated in the cytoplasm by virion assembly factors.
Mature virons are released by lysis, which, in the case of PRD1, is achieved with the aid of virus-encoded lysis machinery consisting of four proteins: P15 (endolysin), P35 (holin), P36 and P37 (homologues of the Rz/Rz1 proteins of phage lambda).
Taxonomy
Tectiviridae contains the following genera and species:
Other unassigned phages:
References
- San Martín C, Huiskonen JT, Bamford JK, Butcher SJ, Fuller SD, Bamford DH, Burnett RM (2002). "Minor proteins, mobile arms and membrane-capsid interactions in the bacteriophage PRD1 capsid". Nature Structural Biology. 9 (10): 756–63. doi:10.1038/nsb837. PMID 12219080. S2CID 32856328.
- ^ "Viral Zone". ExPASy. Retrieved 15 June 2015.
- ^ "Virus Taxonomy: 2020 Release". International Committee on Taxonomy of Viruses (ICTV). March 2021. Retrieved 22 May 2021.
- "ICTV Ninth Report; 2009 Taxonomy Release: Tectiviridae". ICTV. Archived from the original on 24 April 2019. Retrieved 18 September 2020.
- Caldentey J, Hänninen AL, Bamford DH (1994). "Gene XV of bacteriophage PRD1 encodes a lytic enzyme with muramidase activity". Eur J Biochem. 225 (1): 341–346. doi:10.1111/j.1432-1033.1994.00341.x. PMID 7925454.
- Rydman PS, Bamford DH (2003). "Identification and mutational analysis of bacteriophage PRD1 holin protein P35". J Bacteriol. 185 (13): 3795–3803. doi:10.1128/JB.185.13.3795-3803.2003. PMC 161566. PMID 12813073.
- Krupovic M, Cvirkaite-Krupovic V, Bamford DH (2008). "Identification and functional analysis of the Rz/Rz1-like accessory lysis genes in the membrane-containing bacteriophage PRD1". Mol Microbiol. 68 (2): 492–503. doi:10.1111/j.1365-2958.2008.06165.x. PMID 18366440.
- Unclassified Tectiviridae. NCBI Taxonomy.
Further reading
- ICTVdB—The Universal Virus Database ICTVdB Management (2006). 00.068. Tectiviridae. In: ICTVdB—The Universal Virus Database, version 3. Büchen-Osmond, C. (Ed), Columbia University, New York, USA
- Virus Taxonomy: Eighth Report of the International Committee on Taxonomy of Viruses H.V. Van Regenmortel, D.H.L. Bishop, M. H. Van Regenmortel, Claude M. Fauquet (Eds)
- 68.0.1. Tectivirus Archived 28 September 2007 at the Wayback Machine
External links
Taxon identifiers | |
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Tectiviridae |