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VAMP4
Identifiers
Aliases	VAMP4, VAMP-4, VAMP24, vesicle associated membrane protein 4
External IDs	OMIM: 606909; MGI: 1858730; HomoloGene: 37847; GeneCards: VAMP4; OMA:VAMP4 - orthologs
Gene location (Human) Chr. Chromosome 1 (human) Band 1q24.3 Start 171,700,160 bp End 171,742,074 bp
Gene location (Mouse) Chr. Chromosome 1 (mouse) Band 1 H2.1|1 70.29 cM Start 162,398,084 bp End 162,426,653 bp
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in endothelial cell Brodmann area 23 middle temporal gyrus dorsal motor nucleus of vagus nerve inferior olivary nucleus Pons pars compacta lateral nuclear group of thalamus cerebellar vermis tibia Top expressed in gastrula supraoptic nucleus Pituitary Gland motor neuron decidua Epithelium of choroid plexus dorsomedial hypothalamic nucleus lateral septal nucleus islet of Langerhans paraventricular nucleus of hypothalamus More reference expression data BioGPS More reference expression data
Gene ontology Molecular function SNAP receptor activity protein binding SNARE binding Cellular component integral component of membrane cell surface Golgi membrane endosome Golgi apparatus lysosome membrane trans-Golgi network membrane SNARE complex transport vesicle plasma membrane clathrin-coated vesicle membrane integral component of synaptic vesicle membrane synaptic vesicle Biological process endoplasmic reticulum to Golgi vesicle-mediated transport Golgi ribbon formation microtubule cytoskeleton organization vesicle-mediated transport SNARE complex assembly Golgi to plasma membrane protein transport exocytosis membrane organization synaptic vesicle to endosome fusion regulation of synaptic vesicle endocytosis Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 8674 53330 Ensembl ENSG00000117533 ENSMUSG00000026696 UniProt O75379 O70480 RefSeq (mRNA) NM_001185127 NM_003762 NM_201994 NM_016796 NM_001347125 NM_001356526 NM_001356527 RefSeq (protein) NP_001172056 NP_003753 NP_001334054 NP_058076 NP_001343455 NP_001343456 Location (UCSC) Chr 1: 171.7 – 171.74 Mb Chr 1: 162.4 – 162.43 Mb PubMed search
Wikidata
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Vesicle-associated membrane protein 4 is a protein that in humans is encoded by the VAMP4 gene.

Function

Synaptobrevins/VAMPs, syntaxins, and the 25-kD synaptosomal-associated protein SNAP25 are the main components of a protein complex involved in the docking and/or fusion of synaptic vesicles with the presynaptic membrane. The protein encoded by this gene is a member of the vesicle-associated membrane protein (VAMP)/synaptobrevin family. This protein may play a role in trans-Golgi network-to-endosome transport.

Interactions

VAMP4 has been shown to interact with AP1M1, STX6 and STX16.

References

1. ^ GRCh38: Ensembl release 89: ENSG00000117533 – Ensembl, May 2017
2. ^ GRCm38: Ensembl release 89: ENSMUSG00000026696 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Advani RJ, Bae HR, Bock JB, Chao DS, Doung YC, Prekeris R, Yoo JS, Scheller RH (Apr 1998). "Seven novel mammalian SNARE proteins localize to distinct membrane compartments". The Journal of Biological Chemistry. 273 (17): 10317–24. doi:10.1074/jbc.273.17.10317. PMID 9553086.
6. ^ "Entrez Gene: VAMP4 vesicle-associated membrane protein 4".
7. Hinners I, Wendler F, Fei H, Thomas L, Thomas G, Tooze SA (Dec 2003). "AP-1 recruitment to VAMP4 is modulated by phosphorylation-dependent binding of PACS-1". EMBO Reports. 4 (12): 1182–9. doi:10.1038/sj.embor.7400018. PMC 1326413. PMID 14608369.
8. ^ Mallard F, Tang BL, Galli T, Tenza D, Saint-Pol A, Yue X, Antony C, Hong W, Goud B, Johannes L (Feb 2002). "Early/recycling endosomes-to-TGN transport involves two SNARE complexes and a Rab6 isoform". The Journal of Cell Biology. 156 (4): 653–64. doi:10.1083/jcb.200110081. PMC 2174079. PMID 11839770.

Further reading

• Andersson B, Wentland MA, Ricafrente JY, Liu W, Gibbs RA (Apr 1996). "A "double adaptor" method for improved shotgun library construction". Analytical Biochemistry. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
• Yu W, Andersson B, Worley KC, Muzny DM, Ding Y, Liu W, Ricafrente JY, Wentland MA, Lennon G, Gibbs RA (Apr 1997). "Large-scale concatenation cDNA sequencing". Genome Research. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
• Steegmaier M, Klumperman J, Foletti DL, Yoo JS, Scheller RH (Jun 1999). "Vesicle-associated membrane protein 4 is implicated in trans-Golgi network vesicle trafficking". Molecular Biology of the Cell. 10 (6): 1957–72. doi:10.1091/mbc.10.6.1957. PMC 25394. PMID 10359608.
• Scales SJ, Chen YA, Yoo BY, Patel SM, Doung YC, Scheller RH (May 2000). "SNAREs contribute to the specificity of membrane fusion". Neuron. 26 (2): 457–64. doi:10.1016/S0896-6273(00)81177-0. PMID 10839363.
• Peden AA, Park GY, Scheller RH (Dec 2001). "The Di-leucine motif of vesicle-associated membrane protein 4 is required for its localization and AP-1 binding". The Journal of Biological Chemistry. 276 (52): 49183–7. doi:10.1074/jbc.M106646200. PMID 11598115.
• Mallard F, Tang BL, Galli T, Tenza D, Saint-Pol A, Yue X, Antony C, Hong W, Goud B, Johannes L (Feb 2002). "Early/recycling endosomes-to-TGN transport involves two SNARE complexes and a Rab6 isoform". The Journal of Cell Biology. 156 (4): 653–64. doi:10.1083/jcb.200110081. PMC 2174079. PMID 11839770.
• Zeng Q, Tran TT, Tan HX, Hong W (Jun 2003). "The cytoplasmic domain of Vamp4 and Vamp5 is responsible for their correct subcellular targeting: the N-terminal extenSion of VAMP4 contains a dominant autonomous targeting signal for the trans-Golgi network". The Journal of Biological Chemistry. 278 (25): 23046–54. doi:10.1074/jbc.M303214200. PMID 12682051.
• Hinners I, Wendler F, Fei H, Thomas L, Thomas G, Tooze SA (Dec 2003). "AP-1 recruitment to VAMP4 is modulated by phosphorylation-dependent binding of PACS-1". EMBO Reports. 4 (12): 1182–9. doi:10.1038/sj.embor.7400018. PMC 1326413. PMID 14608369.
• Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (Oct 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
• Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M (Nov 2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983. S2CID 7827573.

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