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Acetyl-CoA

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Acetyl-CoA
Names
Preferred IUPAC name O-{(3R)-4-amino}-3-oxopropyl)amino]-3-hydroxy-2,2-dimethyl-4-oxobutyl} O-{methyl} dihydrogen diphosphate
Identifiers
CAS Number
3D model (JSmol)
ChEBI
ChemSpider
ECHA InfoCard 100.000.719 Edit this at Wikidata
IUPHAR/BPS
KEGG
MeSH Acetyl+Coenzyme+A
PubChem CID
UNII
CompTox Dashboard (EPA)
InChI
  • InChI=1S/C23H38N7O17P3S/c1-12(31)51-7-6-25-14(32)4-5-26-21(35)18(34)23(2,3)9-44-50(41,42)47-49(39,40)43-8-13-17(46-48(36,37)38)16(33)22(45-13)30-11-29-15-19(24)27-10-28-20(15)30/h10-11,13,16-18,22,33-34H,4-9H2,1-3H3,(H,25,32)(H,26,35)(H,39,40)(H,41,42)(H2,24,27,28)(H2,36,37,38)/t13-,16-,17-,18+,22-/m1/s1Key: ZSLZBFCDCINBPY-ZSJPKINUSA-N
  • InChI=1/C23H38N7O17P3S/c1-12(31)51-7-6-25-14(32)4-5-26-21(35)18(34)23(2,3)9-44-50(41,42)47-49(39,40)43-8-13-17(46-48(36,37)38)16(33)22(45-13)30-11-29-15-19(24)27-10-28-20(15)30/h10-11,13,16-18,22,33-34H,4-9H2,1-3H3,(H,25,32)(H,26,35)(H,39,40)(H,41,42)(H2,24,27,28)(H2,36,37,38)/t13-,16-,17-,18+,22-/m1/s1Key: ZSLZBFCDCINBPY-ZSJPKINUBJ
SMILES
  • O=C(SCCNC(=O)CCNC(=O)(O)C(C)(C)COP(=O)(O)OP(=O)(O)OC3O(n2cnc1c(ncnc12)N)(O)3OP(=O)(O)O)C
  • CC(=O)SCCNC(=O)CCNC(=O)(C(C)(C)COP(=O)(O)OP(=O)(O)OC1(((O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O
Properties
Chemical formula C23H38N7O17P3S
Molar mass 809.57 g·mol
UV-vismax) 260 nm; 232 nm
Absorbance ε260 = 16.4 mM cm (adenosine)
ε232 = 8.7 mM cm (thioester)
Δε232 on thioester hydrolysis = −4.5 mM cm
Except where otherwise noted, data are given for materials in their standard state (at 25 °C , 100 kPa). ☒verify (what is  ?) Infobox references
Chemical compound

Acetyl-CoA (acetyl coenzyme A) is a molecule that participates in many biochemical reactions in protein, carbohydrate and lipid metabolism. Its main function is to deliver the acetyl group to the citric acid cycle (Krebs cycle) to be oxidized for energy production.

Coenzyme A (CoASH or CoA) consists of a β-mercaptoethylamine group linked to pantothenic acid (vitamin B5) through an amide linkage and 3'-phosphorylated ADP. The acetyl group (indicated in blue in the structural diagram on the right) of acetyl-CoA is linked to the sulfhydryl substituent of the β-mercaptoethylamine group. This thioester linkage is a "high energy" bond, which is particularly reactive. Hydrolysis of the thioester bond is exergonic (−31.5 kJ/mol).

CoA is acetylated to acetyl-CoA by the breakdown of carbohydrates through glycolysis and by the breakdown of fatty acids through β-oxidation. Acetyl-CoA then enters the citric acid cycle, where the acetyl group is oxidized to carbon dioxide and water, and the energy released is captured in the form of 11 ATP and one GTP per acetyl group.

Konrad Bloch and Feodor Lynen were awarded the 1964 Nobel Prize in Physiology or Medicine for their discoveries linking acetyl-CoA and fatty acid metabolism. Fritz Lipmann won the Nobel Prize in 1953 for his discovery of the cofactor coenzyme A.

Role

Acetyl-CoA is a metabolic intermediate that is involved in many metabolic pathways in an organism. It is produced during the breakdown of glucose, fatty acids, and amino acids, and is used in the synthesis of many other biomolecules, including cholesterol, fatty acids, and ketone bodies. Acetyl-CoA is also a key molecule in the citric acid cycle, which is a series of chemical reactions that occur in the mitochondria of cells and is responsible for generating energy in the form of ATP.

In addition, acetyl-CoA is a precursor for the biosynthesis of various acetyl-chemicals, acting as an intermediate to transfer an acetyl group during the biosynthesis of those acetyl-chemicals. Acetyl-CoA is also involved in the regulation of various cellular mechanisms by providing acetyl groups to target amino acid residues for post-translational acetylation reactions of proteins.

Biosynthesis

The acetylation of CoA is determined by the carbon sources.

Extramitochondrial

At high glucose levels, glycolysis takes place rapidly, thus increasing the amount of citrate produced from the citric acid cycle. This citrate is then exported to other organelles outside the mitochondria to be broken into acetyl-CoA and oxaloacetate by the enzyme ATP citrate lyase (ACL). This principal reaction is coupled with the hydrolysis of ATP.

At low glucose levels CoA is acetylated using acetate by acetyl-CoA synthetase (ACS), also coupled with ATP hydrolysis. Ethanol also serves as a carbon source for acetylation of CoA utilizing the enzyme alcohol dehydrogenase. Degradation of branched-chain ketogenic amino acids such as valine, leucine, and isoleucine occurs. These amino acids are converted to α-ketoacids by transamination and eventually to isovaleryl-CoA through oxidative decarboxylation by an α-ketoacid dehydrogenase complex. Isovaleryl-CoA undergoes dehydrogenation, carboxylation and hydration to form another CoA-derivative intermediate before it is cleaved into acetyl-CoA and acetoacetate.

Intramitochondrial

Pyruvate dehydrogenase complex reaction

At high glucose levels, acetyl-CoA is produced through glycolysis. Pyruvate undergoes oxidative decarboxylation in which it loses its carboxyl group (as carbon dioxide) to form acetyl-CoA, giving off 33.5 kJ/mol of energy. The oxidative conversion of pyruvate into acetyl-CoA is referred to as the pyruvate dehydrogenase reaction. It is catalyzed by the pyruvate dehydrogenase complex. Other conversions between pyruvate and acetyl-CoA are possible. For example, pyruvate formate lyase disproportionates pyruvate into acetyl-CoA and formic acid.

β-Oxidation of fatty acids

At low glucose levels, the production of acetyl-CoA is linked to β-oxidation of fatty acids. Fatty acids are first converted to acyl-CoA. Acyl-CoA is then degraded in a four-step cycle of oxidation, hydration, oxidation and thiolysis catalyzed by four respective enzymes, namely acyl-CoA dehydrogenase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase, and thiolase. The cycle produces a new fatty acid chain with two fewer carbons and acetyl-CoA as a byproduct.

Functions

Intermediates in various pathways

Interactive pathway map

Click on genes, proteins and metabolites below to visit Gene Wiki pages and related Misplaced Pages articles. The pathway can be downloaded and edited at WikiPathways.

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|alt=TCACycle_WP78 edit]] TCACycle_WP78 edit
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|alt=Statin pathway edit]] Statin pathway edit

See also

References

  1. ^ Dawson RM, Elliott DC, Elliott WH, Jones KM (2002). Data for Biochemical Research (3rd ed.). Clarendon Press. p. 117. ISBN 978-0-19-855299-4.
  2. "Acetyl CoA Crossroads". chemistry.elmhurst.edu. Archived from the original on 2016-11-15. Retrieved 2016-11-08.
  3. "Fatty Acids -- Structure of Acetyl CoA". library.med.utah.edu. Retrieved 2017-06-02.
  4. "All Nobel Prizes in Physiology or Medicine". The Nobel Prize.
  5. Zhang S, Yang W, Chen H, Liu B, Lin B, Tao Y (August 2019). "Metabolic engineering for efficient supply of acetyl-CoA from different carbon sources in Escherichia coli". Microb Cell Fact. 18 (1): 130. doi:10.1186/s12934-019-1177-y. PMC 6685171. PMID 31387584.
  6. "5.12G: The Acetyl-CoA Pathway". 9 May 2017.
  7. Hynes MJ, Murray SL (2010-07-01). "ATP-Citrate Lyase Is Required for Production of Cytosolic Acetyl Coenzyme A and Development in Aspergillus nidulans". Eukaryotic Cell. 9 (7): 1039–1048. doi:10.1128/EC.00080-10. ISSN 1535-9778. PMC 2901662. PMID 20495057.
  8. Wellen KE, Thompson CB (2012-04-01). "A two-way street: reciprocal regulation of metabolism and signalling". Nature Reviews Molecular Cell Biology. 13 (4): 270–276. doi:10.1038/nrm3305. ISSN 1471-0072. PMID 22395772. S2CID 244613.
  9. Storey KB (2005-02-25). Functional Metabolism: Regulation and Adaptation. John Wiley & Sons. ISBN 9780471675570.
  10. "ACLY ATP citrate lyase [Homo sapiens (human)] - Gene - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2016-11-06.
  11. Ragsdale SW (2004). "Life with carbon monoxide". CRC Critical Reviews in Biochemistry and Molecular Biology. 39 (3): 165–195. doi:10.1080/10409230490496577. PMID 15596550. S2CID 16194968.
  12. Chatterjea (2004-01-01). Textbook of Biochemistry for Dental/Nursing/Pharmacy Students. Jaypee Brothers Publishers. ISBN 9788180612046.
  13. Berg JM, Tymoczko JL, Stryer L (2002). Biochemistry (5th ed.). W. H. Freeman. ISBN 978-0716730514.
  14. Blackstock JC (2014-06-28). Guide to Biochemistry. Butterworth-Heinemann. ISBN 9781483183671.
  15. Houten SM, Wanders RJ (2010-03-02). "A general introduction to the biochemistry of mitochondrial fatty acid β-oxidation". Journal of Inherited Metabolic Disease. 33 (5): 469–477. doi:10.1007/s10545-010-9061-2. ISSN 0141-8955. PMC 2950079. PMID 20195903.
  16. ^ Stryer L (1995). Biochemistry (Fourth ed.). New York: W.H. Freeman and Company. pp. 510–515, 559–565, 581–613, 614–623, 775–778. ISBN 978-0-7167-2009-6.
  17. "Oxidation of fatty acids". 2013-10-11.
  18. "Ketone body metabolism". University of Waterloo.
  19. ^ Ferre P, F. Foufelle (2007). "SREBP-1c Transcription Factor and Lipid Homeostasis: Clinical Perspective". Hormone Research. 68 (2): 72–82. doi:10.1159/000100426 (inactive 2 December 2024). PMID 17344645. this process is outlined graphically in page 73{{cite journal}}: CS1 maint: DOI inactive as of December 2024 (link)
  20. ^ Voet D, Judith G. Voet, Charlotte W. Pratt (2006). Fundamentals of Biochemistry, 2nd Edition. John Wiley and Sons, Inc. pp. 547, 556. ISBN 978-0-471-21495-3.
  21. Fatland BL (2005). "Reverse Genetic Characterization of Cytosolic Acetyl-CoA Generation by ATP-Citrate Lyase in Arabidopsis". The Plant Cell Online. 17 (1): 182–203. Bibcode:2005PlanC..17..182F. doi:10.1105/tpc.104.026211. PMC 544498. PMID 15608338.
  22. Yi CH, Vakifahmetoglu-Norberg H, Yuan J (2011-01-01). "Integration of Apoptosis and Metabolism". Cold Spring Harbor Symposia on Quantitative Biology. 76: 375–387. doi:10.1101/sqb.2011.76.010777. ISSN 0091-7451. PMID 22089928.
  23. Pettit FH, Pelley JW, Reed LJ (1975-07-22). "Regulation of pyruvate dehydrogenase kinase and phosphatase by acetyl-CoA/CoA and NADH/NAD ratios". Biochemical and Biophysical Research Communications. 65 (2): 575–582. doi:10.1016/S0006-291X(75)80185-9. PMID 167775.
  24. Jitrapakdee S, Maurice MS, Rayment I, Cleland WW, Wallace JC, Attwood PV (2008-08-01). "Structure, Mechanism and Regulation of Pyruvate Carboxylase". The Biochemical Journal. 413 (3): 369–387. doi:10.1042/BJ20080709. ISSN 0264-6021. PMC 2859305. PMID 18613815.

External links

Fatty acid metabolic intermediates
Synthesis
Degradation
Peroxisomal
Phytol
Other
Cholesterol and steroid metabolic intermediates
Mevalonate pathway
to HMG-CoA
Ketone bodies
to DMAPP
Geranyl-
Carotenoid
Non-mevalonate pathway
To Cholesterol
From Cholesterol
to Steroid hormones
Nonhuman
To Sitosterol
To Ergocalciferol
Glycolysis metabolic pathway

Glucose

Hexokinase

ATP ADP Rightward reaction arrow with minor substrate(s) from top left and minor product(s) to top right

Glucose 6-phosphate

Glucose-6-phosphate
isomerase

Reversible left-right reaction arrow

Fructose 6-phosphate

Phosphofructokinase-1

ATP ADP Rightward reaction arrow with minor substrate(s) from top left and minor product(s) to top right

Fructose 1,6-bisphosphate

Fructose-bisphosphate
aldolase

Reversible left-right reaction arrow

Dihydroxyacetone phosphate

+

+

Glyceraldehyde 3-phosphate

Triosephosphate
isomerase

Reversible left-right reaction arrow

2 × Glyceraldehyde 3-phosphate

2 × 

Glyceraldehyde-3-phosphate
dehydrogenase

NAD+ Pi NADH + H Reversible left-right reaction arrow with minor forward substrate(s) from top left, minor forward product(s) to top right, minor reverse substrate(s) from bottom right and minor reverse product(s) to bottom leftNAD+ Pi NADH + H

2 × 1,3-Bisphosphoglycerate

2 × 

Phosphoglycerate kinase

ADP ATP Reversible left-right reaction arrow with minor forward substrate(s) from top left, minor forward product(s) to top right, minor reverse substrate(s) from bottom right and minor reverse product(s) to bottom leftADP ATP

2 × 3-Phosphoglycerate

2 × 

Phosphoglycerate mutase

Reversible left-right reaction arrow

2 × 2-Phosphoglycerate

2 × 

Phosphopyruvate
hydratase
(enolase)

  H2O Reversible left-right reaction arrow with minor forward product(s) to top right and minor reverse substrate(s) from bottom right  H2O

2 × Phosphoenolpyruvate

2 × 

Pyruvate kinase

ADP ATP Rightward reaction arrow with minor substrate(s) from top left and minor product(s) to top right

2 × Pyruvate

2 × 
Citric acid cycle metabolic pathway

Acetyl-CoA

+ H2O

Oxaloacetate

Leftward reaction arrow with minor product(s) to bottom left and minor substrate(s) from bottom rightNADH +H NAD

Malate

Leftward reaction arrow with minor substrate(s) from bottom right  H2O

Fumarate

Leftward reaction arrow with minor product(s) to bottom left and minor substrate(s) from bottom rightFADH2 FAD

Succinate

Leftward reaction arrow with minor product(s) to bottom left and minor substrate(s) from bottom rightCoA + ATP (GTP) Pi + ADP (GDP)

Succinyl-CoA

NADH + H + CO2
CoA NAD

Citrate

  H2O Rightward reaction arrow with minor product(s) to top right

cis-Aconitate

H2O   Rightward reaction arrow with minor substrate(s) from top left

Isocitrate

NAD(P) NAD(P)H +  H Rightward reaction arrow with minor substrate(s) from top left and minor product(s) to top right

Oxalosuccinate

  CO2 Rightward reaction arrow with minor product(s) to top right

2-oxoglutarate

Amino acid metabolism metabolic intermediates
Kacetyl-CoA
lysine
leucine
tryptophanalanine
G
G→pyruvate
citrate
glycine
serine
G→glutamate
α-ketoglutarate
histidine
proline
arginine
other
G→propionyl-CoA
succinyl-CoA
valine
isoleucine
methionine
threonine
propionyl-CoA
G→fumarate
phenylalaninetyrosine
G→oxaloacetate
Other
Cysteine metabolism
Acetylcholine receptor modulators
Muscarinic acetylcholine receptor modulators
mAChRsTooltip Muscarinic acetylcholine receptors
Agonists
Antagonists
Precursors
(and prodrugs)
See also
Receptor/signaling modulators
Nicotinic acetylcholine receptor modulators
Acetylcholine metabolism/transport modulators
Nicotinic acetylcholine receptor modulators
nAChRsTooltip Nicotinic acetylcholine receptors
Agonists
(and PAMsTooltip positive allosteric modulators)
Antagonists
(and NAMsTooltip negative allosteric modulators)
Precursors
(and prodrugs)
See also
Receptor/signaling modulators
Muscarinic acetylcholine receptor modulators
Acetylcholine metabolism/transport modulators
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