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60S ribosomal protein L7a

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(Redirected from SURF3) Protein found in humans
RPL7A
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4UG0, 4V6X, 5AJ0, 4UJD, 4D67, 4D5Y, 4UJE, 4UJC

Identifiers
AliasesRPL7A, L7A, SURF3, TRUP, ribosomal protein L7a
External IDsOMIM: 185640; MGI: 1353472; HomoloGene: 105462; GeneCards: RPL7A; OMA:RPL7A - orthologs
Gene location (Human)
Chromosome 9 (human)
Chr.Chromosome 9 (human)
Chromosome 9 (human)Genomic location for RPL7AGenomic location for RPL7A
Band9q34.2Start133,348,218 bp
End133,351,426 bp
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)
Chromosome 2 (mouse)Genomic location for RPL7AGenomic location for RPL7A
Band2 A3|2 19.1 cMStart26,800,776 bp
End26,803,330 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • gonad

  • left ovary

  • islet of Langerhans

  • right uterine tube

  • left adrenal cortex

  • right ovary

  • right adrenal gland

  • right adrenal cortex

  • smooth muscle tissue

  • Pituitary Gland
Top expressed in
  • epiblast

  • ganglionic eminence

  • ventricular zone

  • uterus

  • embryo

  • embryo

  • ovary

  • esophagus

  • lip

  • lens
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6130

27176

Ensembl

ENSG00000280858
ENSG00000148303

ENSMUSG00000062647

UniProt

P62424

P12970

RefSeq (mRNA)

NM_000972

NM_013721

RefSeq (protein)

NP_000963

NP_038749

Location (UCSC)Chr 9: 133.35 – 133.35 MbChr 2: 26.8 – 26.8 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

60S ribosomal protein L7a is a protein that in humans is encoded by the RPL7A gene.

Cytoplasmic ribosomes, organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L7AE family of ribosomal proteins. It can interact with a subclass of nuclear hormone receptors, including thyroid hormone receptor, and inhibit their ability to transactivate by preventing their binding to their DNA response elements. This gene is included in the surfeit gene cluster, a group of very tightly linked genes that do not share sequence similarity. It is co-transcribed with the U24, U36a, U36b, and U36c small nucleolar RNA genes, which are located in its second, fifth, fourth, and sixth introns, respectively. This gene rearranges with the trk proto-oncogene to form the chimeric oncogene trk-2h, which encodes an oncoprotein consisting of the N terminus of ribosomal protein L7a fused to the receptor tyrosine kinase domain of trk. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome.

References

  1. ^ ENSG00000148303 GRCh38: Ensembl release 89: ENSG00000280858, ENSG00000148303Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000062647Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Ziemiecki A, Muller RG, Fu XC, Hynes NE, Kozma S (Feb 1990). "Oncogenic activation of the human trk proto-oncogene by recombination with the ribosomal large subunit protein L7a". EMBO J. 9 (1): 191–6. doi:10.1002/j.1460-2075.1990.tb08095.x. PMC 551645. PMID 2403926.
  6. Kozma SC, Redmond SM, Fu XC, Saurer SM, Groner B, Hynes NE (May 1988). "Activation of the receptor kinase domain of the trk oncogene by recombination with two different cellular sequences". EMBO J. 7 (1): 147–54. doi:10.1002/j.1460-2075.1988.tb02794.x. PMC 454232. PMID 2966065.
  7. ^ "Entrez Gene: RPL7A ribosomal protein L7a".

Further reading


Protein biosynthesis: translation (bacterial, archaeal, eukaryotic)
Proteins
Initiation factor
Bacterial
Mitochondrial
Archaeal
Eukaryotic
eIF1
eIF2
eIF3
eIF4
eIF5
eIF6
Elongation factor
Bacterial/Mitochondrial
Archaeal/Eukaryotic
Release factor
Ribosomal Proteins
Cytoplasmic
60S subunit
40S subunit
Mitochondrial
39S subunit
28S subunit
Other concepts
Ribosomal RNA / ribosome subunits
Archaea
(70S)
Large (50S):
Small (30S):
Bacteria
(70S)
Large (50S):
Small (30S):
Eukaryotes
Cytoplasmic (80S)Large (60S):
Small (40S):
Mitochondrial (55S)Large (28S):
Small (39S):
Chloroplast (70S)Large (50S):
Small (30S):
Ribosomal proteins(See article table)
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