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GNAS complex locus

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Gene locus
GNAS
Identifiers
AliasesGNAS, AHO, C20orf45, GNAS1, GPSA, GSA, GSP, NESP, POH, SCG6, SgVI, GNAS complex locus, PITA3
External IDsOMIM: 139320; MGI: 95777; HomoloGene: 55534; GeneCards: GNAS; OMA:GNAS - orthologs
Gene location (Human)
Chromosome 20 (human)
Chr.Chromosome 20 (human)
Chromosome 20 (human)Genomic location for GNASGenomic location for GNAS
Band20q13.32Start58,839,718 bp
End58,911,192 bp
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)
Chromosome 2 (mouse)Genomic location for GNASGenomic location for GNAS
Band2 H4|2 97.89 cMStart174,126,113 bp
End174,188,537 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • beta cell

  • postcentral gyrus

  • Brodmann area 46

  • Pituitary Gland

  • lateral nuclear group of thalamus

  • anterior pituitary

  • Brodmann area 10

  • entorhinal cortex

  • superior frontal gyrus

  • frontal pole
Top expressed in
  • superior cervical ganglion

  • entorhinal cortex

  • dorsomedial hypothalamic nucleus

  • perirhinal cortex

  • Pituitary Gland

  • CA3 field

  • human fetus

  • central gray substance of midbrain

  • median eminence

  • dermis
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2778

14683

Ensembl

ENSG00000087460

ENSMUSG00000027523

UniProt

O95467
P63092
P84996
Q5JWF2

P63094
Q6R0H7
Q9Z0F1
Q6R0H6

RefSeq (mRNA)
NM_000516
NM_001077488
NM_001077489
NM_001077490
NM_001309840

NM_001309842
NM_001309861
NM_001309883
NM_016592
NM_080425
NM_080426

NM_001077507
NM_001077510
NM_010309
NM_010310
NM_019690

NM_022000
NM_201616
NM_201617
NM_201618
NM_001310083
NM_001310085
NM_001364030

RefSeq (protein)
NP_000507
NP_001070956
NP_001070957
NP_001070958
NP_001296769

NP_001296771
NP_001296790
NP_001296812
NP_057676
NP_536350
NP_536351
NP_000507.1
NP_001070956.1
NP_001070957.1
NP_001070958.1
NP_001296769.1
NP_536350.2
NP_536351.1
NP_001070958.1
NP_001296812.1
NP_001296812.1
NP_536350.2

NP_001070975
NP_001070978
NP_001297012
NP_001297014
NP_034439

NP_062664
NP_068840
NP_963910
NP_963911
NP_963912
NP_001350959
NP_001070975.1
NP_001297014.1
NP_034439.2
NP_963911.1
NP_062664.2
NP_068840.2
NP_001070975.1
NP_001297014.1
NP_963911.1
NP_963912.1

Location (UCSC)Chr 20: 58.84 – 58.91 MbChr 2: 174.13 – 174.19 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

GNAS complex locus is a gene locus in humans. Its main product is the heterotrimeric G-protein alpha subunit Gs, a key component of G protein-coupled receptor-regulated adenylyl cyclase signal transduction pathways. GNAS stands for Guanine Nucleotide binding protein, Alpha Stimulating activity polypeptide.

Gene

This gene locus has a highly complex imprinted expression pattern. It gives rise to maternally-, paternally- and biallelically-expressed transcripts that are derived from four alternative promoters with distinct 5' exons. Some transcripts contain a differentially methylated region (DMR) within their 5' exons; such DMRs are commonly found in imprinted genes and correlate with transcript expression. An antisense transcript also exists, and this antisense transcript and one of the sense transcripts are paternally expressed, produce non-coding RNAs and may regulate imprinting in this region. In addition, one of the transcripts contains a second frame-shifted open reading frame, which encodes a structurally unrelated protein named ALEX.

Products and functions

The GNAS locus is imprinted and encodes 5 main transcripts:

  • Gs (Gs-α long, P63092-1), biallelic
  • A/B transcript (Gs-α short, P63092-2), biallelic: contains an alternate 5' terminal exon (A/B or Exon 1A) and uses a downstream start codon to have a shortened amino terminal region.
    • STX16 deletion causes loss of methylation at the A/B exon, leading to PHP1B.
  • XLαs (Extra long alpha-s, Q5JWF2), paternal
    • ALEX (Alternative gene product encoded by XL-exon, P84996), may inhibit XLαs
  • NESP55 (Neuroendocrine secretory protein 55, O95467), maternal
  • antisense GNAS transcript (Nespas: neuroendocrine secretory protein antisense)
    • Binds to the PRC2 complex. Abolition of expression causes abnormal methylation and imprinting loss.

Alternative splicing of downstream exons is also observed, which results in different forms of the Gs-α, a key element of the classical signal transduction pathway linking receptor-ligand interactions with the activation of adenylyl cyclase and a variety of cellular responses. Multiple transcript variants have been found for this gene, but the full-length nature and/or biological validity of some variants have not been determined.

Three of the GNAS gene products, Gsα-long, Gsα-short, and XLαs, are different forms of Gsα, and differ mainly in the N-terminal region. Traditional G protein-coupled receptor signaling proceeds primarily through Gsα-long and Gsα-short, the most abundant, ubiquitously-expressed protein products of this gene. XLαs is the "extra large" isoform, and has a very long N-terminal region with some internal repeats not well-conserved across species. The XL exon also encodes in another reading frame the protein product ALEX, an inhibitory cofactor binding to the unique domain. The structure for GNAS is solved for the canonical P63092-1 isoform only, and little is known about what the special region of XLas or ALEX looks like.

NESP55 is a protein product completely unrelated to the GNAS protein. It undergoes extensive posttranslation processing, and is sometimes grouped as a granin. Nearly nothing is known about its structure; protein structure prediction predicts a mostly disordered protein with an N-terminal globular domain made up of alpha-helices.

Clinical significance

Mutations in GNAS products are associated with:

Mutations in this gene also result in progressive osseous heteroplasia, polyostotic fibrous dysplasia of bone, and some pituitary tumors. Mutations in the repeat region of the XL exon leads to a hyperactive form of XLas due to lowered interaction with ALEX. As XLas is expressed in platelets, the risk of bleeding is elevated.

Many alleles in mice have been constructed for analyzing disease associations. Mice with this gene half knocked-out and half-mutated (tm1Jop/Oedsml) display increased heart weight, increased startle reflex, and abnormalities in bone structure and mineralization; some other alternations can be lethal. Metabolic problems resembling pseudohypoparathyroidism are seen in heterozygous mutated (wt/Oedsml) mice. Knocking out the antisense transcript is known to, at minimum, cause methylation defects.

Interactions

G protein-coupled receptor-activated Gsα binds to the enzyme adenylyl cyclase, increasing its rate of conversion of ATP to cyclic AMP.

Gsα has been shown to interact with RIC8A.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000087460Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000027523Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "Symbol report for GNAS". HUGO Gene Nomenclature Committee.
  6. Klemke M, Kehlenbach RH, Huttner WB (July 2001). "Two overlapping reading frames in a single exon encode interacting proteins--a novel way of gene usage". The EMBO Journal. 20 (14): 3849–60. doi:10.1093/emboj/20.14.3849. PMC 125537. PMID 11447126.
  7. ^ Abramowitz J, Grenet D, Birnbaumer M, Torres HN, Birnbaumer L (June 2004). "XLalphas, the extra-long form of the alpha-subunit of the Gs G protein, is significantly longer than suspected, and so is its companion Alex". Proceedings of the National Academy of Sciences of the United States of America. 101 (22): 8366–71. Bibcode:2004PNAS..101.8366A. doi:10.1073/pnas.0308758101. PMC 420400. PMID 15148396.
  8. Zhao J, Ohsumi TK, Kung JT, Ogawa Y, Grau DJ, Sarma K, Song JJ, Kingston RE, Borowsky M, Lee JT (December 2010). "Genome-wide identification of polycomb-associated RNAs by RIP-seq". Molecular Cell. 40 (6): 939–53. doi:10.1016/j.molcel.2010.12.011. PMC 3021903. PMID 21172659.
  9. "Nespas". Long non-coding RNA db. Archived from the original on 18 June 2017. Retrieved 3 May 2019.
  10. ^ Freson K, Jaeken J, Van Helvoirt M, de Zegher F, Wittevrongel C, Thys C, Hoylaerts MF, Vermylen J, Van Geet C (May 2003). "Functional polymorphisms in the paternally expressed XLalphas and its cofactor ALEX decrease their mutual interaction and enhance receptor-mediated cAMP formation". Human Molecular Genetics. 12 (10): 1121–30. doi:10.1093/hmg/ddg130. PMID 12719376.
  11. Bartolomucci A, Possenti R, Mahata SK, Fischer-Colbrie R, Loh YP, Salton SR (December 2011). "The extended granin family: structure, function, and biomedical implications". Endocrine Reviews. 32 (6): 755–97. doi:10.1210/er.2010-0027. PMC 3591675. PMID 21862681.
  12. Jianwei Zhu, Sheng Wang, Dongbo Bu, Jinbo Xu. "Result for NESP55". RaptorX. Archived from the original on 4 May 2019. Retrieved 4 May 2019. Compare outputs
  13. "O95467". MobiDB. Retrieved 4 May 2019.
  14. Delaney D, Diss TC, Presneau N, Hing S, Berisha F, Idowu BD, O'Donnell P, Skinner JA, Tirabosco R, Flanagan AM (May 2009). "GNAS1 mutations occur more commonly than previously thought in intramuscular myxoma". Modern Pathology. 22 (5): 718–24. doi:10.1038/modpathol.2009.32. PMID 19287459.
  15. "Entrez Gene: GNAS GNAS complex locus".
  16. Freson K, Hoylaerts MF, Jaeken J, Eyssen M, Arnout J, Vermylen J, Van Geet C (September 2001). "Genetic variation of the extra-large stimulatory G protein alpha-subunit leads to Gs hyperfunction in platelets and is a risk factor for bleeding". Thrombosis and Haemostasis. 86 (3): 733–8. doi:10.1055/s-0037-1616126. PMID 11583302. S2CID 34153703.
  17. "Gnas - GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus". International Mouse Phenotyping Consortium. Retrieved 3 May 2019.
  18. "Gnas Phenotype Annotations". Mouse Genome Informatics.
  19. "Gnas Chemically induced Allele Detail MGI Mouse (MGI:2183318)". Mouse Genome Informatics. Retrieved 3 May 2019.
  20. "Nespas Phenotype Annotations". Mouse Genome Informatics.
  21. Hanoune J, Defer N (April 2001). "Regulation and role of adenylyl cyclase isoforms". Annual Review of Pharmacology and Toxicology. 41 (1): 145–74. doi:10.1146/annurev.pharmtox.41.1.145. PMID 11264454.
  22. Klattenhoff C, Montecino M, Soto X, Guzmán L, Romo X, García MA, Mellstrom B, Naranjo JR, Hinrichs MV, Olate J (May 2003). "Human brain synembryn interacts with Gsalpha and Gqalpha and is translocated to the plasma membrane in response to isoproterenol and carbachol". Journal of Cellular Physiology. 195 (2): 151–7. doi:10.1002/jcp.10300. hdl:10533/174200. PMID 12652642. S2CID 84975473.

Further reading

External links

PDB gallery
  • 1azs: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE 1azs: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE
  • 1azt: GS-ALPHA COMPLEXED WITH GTP-GAMMA-S 1azt: GS-ALPHA COMPLEXED WITH GTP-GAMMA-S
  • 1cjk: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH ADENOSINE 5'-(ALPHA THIO)-TRIPHOSPHATE (RP), MG, AND MN 1cjk: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH ADENOSINE 5'-(ALPHA THIO)-TRIPHOSPHATE (RP), MG, AND MN
  • 1cjt: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH BETA-L-2',3'-DIDEOXYATP, MN, AND MG 1cjt: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH BETA-L-2',3'-DIDEOXYATP, MN, AND MG
  • 1cju: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH BETA-L-2',3'-DIDEOXYATP AND MG 1cju: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH BETA-L-2',3'-DIDEOXYATP AND MG
  • 1cjv: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH BETA-L-2',3'-DIDEOXYATP, MG, AND ZN 1cjv: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH BETA-L-2',3'-DIDEOXYATP, MG, AND ZN
  • 1cs4: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH 2'-DEOXY-ADENOSINE 3'-MONOPHOSPHATE, PYROPHOSPHATE AND MG 1cs4: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH 2'-DEOXY-ADENOSINE 3'-MONOPHOSPHATE, PYROPHOSPHATE AND MG
  • 1cul: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH 2',5'-DIDEOXY-ADENOSINE 3'-TRIPHOSPHATE AND MG 1cul: COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH 2',5'-DIDEOXY-ADENOSINE 3'-TRIPHOSPHATE AND MG
  • 1tl7: Complex Of Gs- With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2'(3')-O-(N-methylanthraniloyl)-guanosine 5'-triphosphate and Mn 1tl7: Complex Of Gs- With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2'(3')-O-(N-methylanthraniloyl)-guanosine 5'-triphosphate and Mn
  • 1u0h: STRUCTURAL BASIS FOR THE INHIBITION OF MAMMALIAN ADENYLYL CYCLASE BY MANT-GTP 1u0h: STRUCTURAL BASIS FOR THE INHIBITION OF MAMMALIAN ADENYLYL CYCLASE BY MANT-GTP
  • 2gvd: Complex Of Gs- With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With TNP-ATP and Mn 2gvd: Complex Of Gs- With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With TNP-ATP and Mn
  • 2gvz: Crystal Structure of Complex of Gs- with The Catalytic Domains of Mammalian Adenylyl Cyclase: Complex with MANT-ATP and Mn 2gvz: Crystal Structure of Complex of Gs- with The Catalytic Domains of Mammalian Adenylyl Cyclase: Complex with MANT-ATP and Mn
Hydrolases: acid anhydride hydrolases (EC 3.6)
3.6.1
3.6.2
3.6.3-4: ATPase
3.6.3
Cu++ (3.6.3.4)
Ca+ (3.6.3.8)
Na+/K+ (3.6.3.9)
H+/K+ (3.6.3.10)
Other P-type ATPase
3.6.4
3.6.5: GTPase
3.6.5.1: Heterotrimeric G protein
3.6.5.2: Small GTPase > Ras superfamily
3.6.5.3: Protein-synthesizing GTPase
3.6.5.5-6: Polymerization motors
Intracellular signaling peptides and proteins
MAP
Calcium
G protein
Heterotrimeric
cAMP:
cGMP:
Monomeric
Cyclin
Lipid
Other protein kinase
Serine/threonine:
Tyrosine:
Serine/threonine/tyrosine
Arginine
Other protein phosphatase
Serine/threonine:
Tyrosine:
both:
Apoptosis
GTP-binding protein regulators
Other
see also deficiencies of intracellular signaling peptides and proteins
Categories: