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BAFF receptor

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Mammalian protein found in Homo sapiens
TNFRSF13C
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1MPV, 1OQE, 1OSX, 2HFG, 3V56, 4V46

Identifiers
AliasesTNFRSF13C, BAFF-R, BAFFR, BROMIX, CD268, CVID4, prolixin, tumor necrosis factor receptor superfamily member 13C, TNF receptor superfamily member 13C
External IDsOMIM: 606269; MGI: 1919299; HomoloGene: 49897; GeneCards: TNFRSF13C; OMA:TNFRSF13C - orthologs
Gene location (Human)
Chromosome 22 (human)
Chr.Chromosome 22 (human)
Chromosome 22 (human)Genomic location for TNFRSF13CGenomic location for TNFRSF13C
Band22q13.2Start41,922,032 bp
End41,926,806 bp
Gene location (Mouse)
Chromosome 15 (mouse)
Chr.Chromosome 15 (mouse)
Chromosome 15 (mouse)Genomic location for TNFRSF13CGenomic location for TNFRSF13C
Band15|15 E1Start82,105,944 bp
End82,108,570 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • spleen

  • lymph node

  • appendix

  • bone marrow cells

  • granulocyte

  • testicle

  • blood

  • tonsil

  • ventricular zone

  • mucosa of transverse colon
Top expressed in
  • mesenteric lymph nodes

  • spleen

  • blood

  • submandibular gland

  • tunica adventitia of aorta

  • subcutaneous adipose tissue

  • tunica media of zone of aorta

  • morula

  • lumbar subsegment of spinal cord

  • granulocyte
More reference expression data
BioGPS
n/a
Orthologs
SpeciesHumanMouse
Entrez

115650

72049

Ensembl

ENSG00000159958

ENSMUSG00000068105

UniProt

Q96RJ3

Q9D8D0

RefSeq (mRNA)

NM_052945

NM_028075
NM_001357758

RefSeq (protein)

NP_443177

NP_082351
NP_001344687

Location (UCSC)Chr 22: 41.92 – 41.93 MbChr 15: 82.11 – 82.11 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

BAFF receptor (B-cell activating factor receptor, BAFF-R), also known as tumor necrosis factor receptor superfamily member 13C (TNFRSF13C) and BLyS receptor 3 (BR3), is a membrane protein of the TNF receptor superfamily which recognizes BAFF, an essential factor for B cell maturation and survival. In humans it is encoded by the TNFRSF13C gene.

Function

B-cell activating factor (BAFF) enhances B-cell survival in vitro and is a regulator of the peripheral B-cell population. The protein encoded by this gene is a receptor for BAFF and is a type III transmembrane protein containing a single extracellular phenylalanine-rich domain. It is thought that this receptor is the principal receptor required for BAFF-mediated mature B-cell survival. In B cell maturation, due to regulation by BAFF-R, only a limited amount of B-cell will survive.

Clinical significance

Overexpression of BAFF in mice results in mature B-cell hyperplasia and symptoms of systemic lupus erythematosus (SLE). Also, some SLE patients have increased levels of BAFF in serum. Therefore, it has been proposed that abnormally high levels of BAFF may contribute to the pathogenesis of autoimmune diseases by enhancing the survival of autoreactive B cells, which are cells that show immune response to normal body cells. Autoreactive B cells are less sensitive toward BAFF and are usually outcompeted by the normal B cells in the maturation process regulated by low BAFF-R expression. An elevated level of BAFF-R can therefore overcome this decreased response and result in accumulation of autoreactive B cells.

BAFF and BAFF-R pair can also down-regulate the cell apoptosis process.

See also

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000159958Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000068105Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Thompson JS, Bixler SA, Qian F, Vora K, Scott ML, Cachero TG, Hession C, Schneider P, Sizing ID, Mullen C, Strauch K, Zafari M, Benjamin CD, Tschopp J, Browning JL, Ambrose C (September 2001). "BAFF-R, a newly identified TNF receptor that specifically interacts with BAFF". Science. 293 (5537): 2108–11. Bibcode:2001Sci...293.2108T. doi:10.1126/science.1061965. PMID 11509692. S2CID 42673198.
  6. Yan M, Brady JR, Chan B, Lee WP, Hsu B, Harless S, Cancro M, Grewal IS, Dixit VM (October 2001). "Identification of a novel receptor for B lymphocyte stimulator that is mutated in a mouse strain with severe B cell deficiency". Current Biology. 11 (19): 1547–52. Bibcode:2001CBio...11.1547Y. doi:10.1016/S0960-9822(01)00481-X. PMID 11591325. S2CID 13925100.
  7. ^ "Entrez Gene: TNFRSF13C tumor necrosis factor receptor superfamily, member 13C".
  8. ^ Brink R (October 2006). "Regulation of B cell self-tolerance by BAFF". Seminars in Immunology. 18 (5): 276–83. doi:10.1016/j.smim.2006.04.003. PMID 16916609.
  9. Rauch M, Tussiwand R, Bosco N, Rolink AG (2009-05-06). "Crucial role for BAFF-BAFF-R signaling in the survival and maintenance of mature B cells". PLOS ONE. 4 (5): e5456. Bibcode:2009PLoSO...4.5456R. doi:10.1371/journal.pone.0005456. PMC 2673681. PMID 19421318.

External links

Further reading

PDB gallery
  • 1oqe: Crystal structure of sTALL-1 with BAFF-R 1oqe: Crystal structure of sTALL-1 with BAFF-R
  • 1osx: Solution Structure of the Extracellular Domain of BLyS Receptor 3 (BR3) 1osx: Solution Structure of the Extracellular Domain of BLyS Receptor 3 (BR3)
  • 1p0t: Crystal Structure of the BAFF-BAFF-R complex (part II) 1p0t: Crystal Structure of the BAFF-BAFF-R complex (part II)
  • 2hfg: Crystal structure of hBR3 bound to CB3s-Fab 2hfg: Crystal structure of hBR3 bound to CB3s-Fab
Proteins: clusters of differentiation (see also list of human clusters of differentiation)
1–50
51–100
101–150
151–200
201–250
251–300
301–350
Cytokine receptors
Chemokine receptor
(GPCRs)
CC
CXC
Other
TNF receptor
1-10
11-20
21-27
JAK-STAT
Type I
γ-chain
β-chain
gp130
IL12RB1
Other
Type II
Ig superfamily
IL 17 family
Enzyme-linked receptor
Cytokine receptor modulators
Chemokine
CSF
Erythropoietin
G-CSF (CSF3)
GM-CSF (CSF2)
M-CSF (CSF1)
SCF (c-Kit)
Thrombopoietin
Interferon
IFNAR (α/β, I)
IFNGR (γ, II)
IFNLR (λ, III)
  • See IL-28R (IFNLR) here instead.
Interleukin
TGFβ
TNF
Others
JAK
(inhibitors)
JAK1
JAK2
JAK3
TYK2
Others

This article incorporates text from the United States National Library of Medicine, which is in the public domain.


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